KEGG   Sulfurifustis variabilis: SVA_3870
Entry
SVA_3870          CDS       T05321                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sva  Sulfurifustis variabilis
Pathway
sva03030  DNA replication
sva03410  Base excision repair
sva03420  Nucleotide excision repair
sva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SVA_3870
   03410 Base excision repair
    SVA_3870
   03420 Nucleotide excision repair
    SVA_3870
   03440 Homologous recombination
    SVA_3870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sva03032]
    SVA_3870
   03400 DNA repair and recombination proteins [BR:sva03400]
    SVA_3870
Enzymes [BR:sva01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SVA_3870
DNA replication proteins [BR:sva03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SVA_3870
DNA repair and recombination proteins [BR:sva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SVA_3870
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SVA_3870
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_pol_lambd_f HHH_5 HHH IMS_HHH
Other DBs
NCBI-ProteinID: BAU50404
UniProt: A0A1B4VC26
Position
complement(3912537..3915311)
AA seq 924 aa
MPRKKPQSDGAPAPARKPEPADTPRRADGANTLVLVDGSSYLYRAFHAMPSLTNSRGEAT
GAVYGVTNMLRKLLADYDPAYVAVVFDAKGRTFRDDVYPEYKANRPPMPDALSAQIEPIH
EIVRALGFPLLQIDNVEADDVIGTLARLAASQGMSTLVSTGDKDMTQLVDGHVTLVNTMT
GTVYDRAKVIEKFGVPPERIIDFLALVGDSVDNIPGVPGVGPKTAARWLAEHGSLEAVIA
GAAGIPGKVGDSLRAALPVLPLARELATIKCDVPLALGPRDLKRLPPDTARLRELYSRLE
FRTWLAELGGVNPPASTTVPGERASYETVLDQAALERWLERLAGAELFALGTEATSPDAP
RAELVGIAFTVRAGEGAYVPLAHAYPGAPEQLDRDAVLARLKPLLEDERRSKVGHNLKYA
TTVLANCGIALRGVAYDTMLESYVLDSTASRHDMESLALKYLGYKTVKYEDVAGKGKAQI
NFREVAIEQAAAYAGEDADLTLRLHACLWPRLEQNRALVTLFRELELPLVAVLSRMERNG
VRIDVEMLRRQSGELAHRMLEIEREAHSAAGQPFNLDSPKQIQEILFRKLALPVLRKTPT
GQPSTGEDVLAELALDYPLPRLILEYRSLAKLKSTYTDKLPEMINPATGRVHTCYHQAVA
ATGRLSSSDPNLQNIPVRTAEGRRIRQAFVPEPGYRIVSADYSQIELRIMAHLSGDPGLI
QAFAAGQDIHRATAAEVFGLPPDQVPDEMRRAAKAINFGLIYGMSAFGLSRQLKIDRAAA
QQYVDLYFARYPGVKAFMDRTREQARTRGYVETLFGRRLHLPDINAPNVSRRQGAERAAI
NAPMQGTAADLIKRAMLAVDRWITESRAPVRMIMQVHDELVFEVAEGFVETAIERVRDAM
ATVATLEVPLVVDVGVGANWDEAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgccacggaaaaaacctcaatctgacggcgcaccggccccggcgcgcaagcccgagccc
gccgatacgcctcgtcgggccgacggcgcgaacacgctggtcctggtcgacgggtcatct
tatctgtaccgcgccttccacgccatgccgagcctcaccaactcccgcggcgaagcgacc
ggggcggtgtacggcgttacgaatatgctgcgcaagctgctcgccgattacgaccccgcg
tacgtcgcggtcgtgttcgacgccaagggcaggacgttccgcgacgacgtgtaccccgag
tacaaggcgaaccggccgcccatgcccgacgccctctcggcccagatcgagccgattcac
gagatcgtgcgagccctgggcttccccctgctgcagatcgacaacgtggaggcggacgac
gtcatcggaacgctcgcccggctcgccgcgtcgcagggcatgagcacgctggtgtcgacc
ggcgacaaggacatgacgcagctcgtggacggtcacgtgacgctggtcaacacgatgacc
ggaacggtctacgatcgcgcgaaggtcatcgagaagttcggcgtgccgcccgagcgcatc
atcgacttcctggcgctcgtcggcgattcggtcgacaacatccccggggtgcccggtgtc
ggtccgaagaccgccgccaggtggctcgcggagcacggctcgctcgaggccgtcatcgcc
ggcgccgccgggattccgggcaaggtcggcgacagcctgcgcgccgccctgcccgtgctg
ccgctcgcgcgcgagctcgcgaccatcaagtgcgacgtccccctcgcgctcggtccccgt
gacttgaagcgactgccgccggacaccgcccgcctgcgcgagctctactcgcggctcgag
ttcaggacctggctcgccgagctcggcggcgtcaatcccccggcgtcgacgacggtcccg
ggcgaacgagcgtcgtacgagaccgtgctcgaccaagcggcgctggaacgctggctcgaa
cgtctcgccggcgccgagctcttcgcgctcgggaccgaggcgacgagccccgacgcgccg
cgcgccgagctggtcggcattgcctttaccgttcgagcgggcgaaggcgcctacgtcccg
ctcgcgcacgcttaccccggcgcgccggagcagctcgaccgcgacgcggtgctcgcgcgg
ctgaagccgctgctcgaagacgagcgccggagcaaggtggggcacaacctcaagtacgcc
acgaccgtactggcgaactgcggcatcgcgctgcgcggcgtcgcttacgatacgatgctc
gagtcgtacgtgctcgactcgacggcgtcgcgtcacgacatggagagcctcgccctcaag
tacctcggctacaagacggtcaagtacgaggacgtcgcaggcaagggaaaggcgcagatc
aacttccgtgaagtggcgatcgaacaggccgccgcttatgccggcgaggacgccgacctg
accctgcggctgcacgcgtgtctctggccgcgtctcgagcagaaccgggcgctcgtgacg
ctcttccgcgagctcgagctcccgctggtcgccgtgctttcacgaatggaacgaaacggc
gtgcgcatcgacgtcgaaatgctgcggcgccagagcggcgagctcgcgcaccgtatgctc
gagatcgagcgggaagcgcactccgccgccgggcaacccttcaacctcgactccccgaag
cagatccaggagatcctgttccggaagctcgcgcttccggtgctgcgcaagacgccgacc
ggccagccctcgaccggagaggacgtgctcgccgagctggcgctcgactacccgctgccg
cgcctcatcctggagtaccggagcctcgcgaagctcaagtcgacctataccgacaagctc
cccgagatgatcaatcccgctaccggccgcgtgcacacctgctatcaccaggcggtcgcc
gcaacggggcggctgtcgtcgtcggatcccaacctccagaacattcccgtccgcacggcc
gaaggccggcgcatccgccaggccttcgttcccgaaccgggctaccgcatcgtctcggcc
gattactcgcagatcgagctgcgcatcatggcgcatctctccggcgacccgggcctgatc
caggcgttcgccgccggacaggacatccaccgggccaccgccgccgaggtgttcgggctg
ccgcccgaccaggtaccggacgagatgcggcgtgcggcgaaggcgatcaacttcggtctg
atctacggcatgtcggccttcgggctgtcgcgacagctcaagatcgatcgtgcggcggca
cagcaatatgtcgacctttacttcgcgcgttatccgggcgtgaaggccttcatggaccgg
acgcgggagcaggcgcgcacgcgggggtacgtggaaacgctcttcggacgccgtctccat
ctgcccgacatcaacgccccgaacgtctctcgccggcaaggcgccgagcgggcggccatc
aacgcgccgatgcagggtaccgccgcggacctgatcaagcgcgccatgctggcggtcgat
cgctggataaccgagagccgcgcgccggtgcgcatgatcatgcaggtccatgacgaactg
gtgttcgaggtcgccgaggggttcgtcgaaactgccatcgagcgggtccgtgacgccatg
gccaccgtggccacgctcgaggttcccctcgtggtggacgtgggtgtgggagccaactgg
gacgaggcccattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (44)   

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