KEGG T00980: Svir

Saccharomonospora viridis: Svir_03810

Entry

Svir_03810 CDS T00980

Definition

DNA-directed RNA polymerase subunit beta'

Orthology

K03046

DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]

Organism

svi Saccharomonospora viridis

Pathway

svi00230	Purine metabolism
svi00240	Pyrimidine metabolism
svi01100	Metabolic pathways
svi03020	RNA polymerase

Module

svi_M00183

RNA polymerase, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:svi00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:svi00240]
Genetic Information Processing; Transcription; RNA polymerase [PATH:svi03020]

SSDB

Motif

Pfam:

RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4

Other DBs

NCBI-GI:

257054453

NCBI-GeneID:

8385719

UniProt:

C7MTI8

Position

380014..383925

AA seq 1303 aa
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVNTELRQNDLPTLENEINVERKNIENKRDAEIEQRAQKLEAD
LAELEAEGAKADVRRKVKESGEREMRQIRDRAQRELDRLEEVWTTFTKLEPRQLIVDEQL
YRELYDRYGEYFTGGMGAEAIQKLASEFDVDAEAEALRETIRTGKGQKKLRALKRLKVVA
AFQSTGNDPRGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKDMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PQVWDVLEEVINGHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILSPASGRPLAMPRLDMVTGLFHLTRLDENAKGAGA
AYSSPAEAIMAYDRGQLALHAPVKIRIHDRQPPKSEEAALREKGWEPGKPWLAETTLGRV
LFNDLLPEDYPFVNEVLPKKRQAAIVNDLAERYSMTQVAQTLDGLKDAGFHWATRSGVTI
SITDVVVPPQKQELLEQYEAKAAQVEKRYQRGQLSHAERNNELVKVWSQATEDVAKAMEE
NLPDDNPIAMIVKSGAAGNMTQVRSLAGMRGLVSNPKGEYIPRPIKANFREGLTVAEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTSRGITRTIADELPDGRLV
RAEHVETSVYARNLAADAVDEQGNVILNAGEDLSDPAIERLIQAGISKVKVRSVLTCESA
MGVCATCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPR
VTELFEARVPKGKAPIADVDGRVRIEESERFWKITLIPDDGSEEIVFDKLSKRQRLAIGP
NGPLADGDHVKVGQPLLEGTPDPHEVLRVMGPREAQMHLVEEVQKVYRAQGVSIHDKHIE
VIVRQMLRRVTIIDSGSTEFLPGELPERSKFEQVNRKAVAEGGEPASGRPVLMGITKASL
TTDSWLSAASFQETTRVLTDAAINGRSDALIGLKENVIIGKLIPAGTGINRYRNIQVQPT
EEARVAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDFR

NT seq 3912 nt +upstreamnt +downstreamnt
gtgctggacgtcaatttcttcgatgagctccggatcggtctcgccacggccgacgacatc
cgtcagtggtcttacggcgaagtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacggcctcttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggtgtc
gaggtgactcgcgccaaggtgcgtcgcgagcggatgggccacatcgagctggccgcaccg
gtcacccacatctggtacttcaagggtgttccttcgcgtctgggctacctgctcgacctc
gcgccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcaccagcgtgaac
acggagctgcgacagaacgacctgccgacgttggagaacgagatcaacgtcgagcggaag
aacatcgagaacaagcgtgacgccgagatcgagcagcgggcgcagaagctcgaggccgac
ctcgccgagttggaggccgagggcgccaaggccgacgttcgccgcaaggtcaaggagagc
ggcgaacgcgagatgcggcagatccgcgaccgtgcccagcgcgagctggaccgcctggag
gaggtctggacgaccttcaccaagctggagccgcgtcagctcatcgtggacgagcagctt
taccgggagctgtacgaccgctacggcgagtacttcaccggcggcatgggcgccgaggcc
atccagaagctggccagcgagttcgacgtcgacgctgaggccgaagcgctgcgcgagacc
atccgcaccggtaagggccagaagaagctgcgtgccctgaagcgactgaaggtcgtcgcc
gcgttccagtccaccggcaacgacccgcgcggcatggtgctcgacgcgatcccggtcatc
ccgccggagctgcgtccgatggtccagctcgacggtggtcgtttcgccacctctgacctc
aacgacctgtaccgtcgtgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgttgcaggaggccgtcgacgcg
ttgttcgacaacggccgtcgcggtcgccccgtcaccggtcctggtaaccgtccgctgaag
tcgctgtccgacctgctcaagggcaagcagggacggttccggcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtcatcatcgtcggtccgcagttgaagctgcaccag
tgcggtctgcccaaggacatggcgctggagctgttcaagcccttcgtcatgaagcggctg
gtcgacctcaaccacgcacagaacatcaagtccgccaagcggatggtcgaacgtgcccgt
ccgcaggtgtgggacgtgctggaagaggtcatcaacggccaccccgtgctgctcaaccgt
gctccgacgctgcaccgtctcggtatccaggcgttcgagccgcagctcgtggaaggtaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggcgaccag
atggcggtgcacctgccgctgtccgcggaggcgcaggccgaggcgcgcatcctgatgctg
tcggcgaacaacatcctgtcgcccgcgtcgggtcgtccgctcgccatgccgcgtctggac
atggtgaccggcctgttccacctcacccgtctcgacgagaacgcgaagggtgcgggtgcg
gcctactcctcgcccgccgaggcgatcatggcctacgaccgcgggcagctcgcgctgcac
gccccggtgaagatccggatccacgaccgccagccgccgaagtcggaagaggcggcgctg
cgcgagaagggttgggagcccggaaaaccgtggttggctgagacgacgcttggccgggtg
ctgttcaacgacctgctgccggaggactacccgttcgtcaacgaagtcctgccgaagaag
cggcaggccgcgatcgtcaacgacctcgccgagcggtactcgatgacccaggtcgcgcag
accctcgacgggctcaaggacgccggcttccactgggcgacgcgttccggcgtgaccatc
tccatcaccgacgtggtcgtgccgccgcagaagcaggagctgctcgagcagtacgaggcc
aaggccgcgcaggtggagaagcgctaccagcgtggtcagctgtcccacgccgagcgcaac
aacgagctcgtcaaggtgtggagccaggcgaccgaggacgtcgccaaggccatggaggag
aacctccccgacgacaacccgatcgcgatgatcgtgaagtccggtgcggcgggcaacatg
acccaggtccggtcgctggccggtatgcgtggtctggtgtccaacccgaagggtgagtac
atcccgcgcccgatcaaggccaacttccgtgagggcctgacggtggcggagtacttcatc
gccacgcacggtgcccgtaagggtctggccgacaccgctctgcggaccgccgactcgggt
tacctgacccgtcgtctggtggacgtgtcgcaggacgtcatcgtgcgcgagaccgactgt
ggcaccagccgcggtatcacgaggaccatcgcggacgagctgcccgacggccgtctggtg
cgtgccgagcacgtcgagaccagcgtctacgcccgcaacctcgccgccgacgcggtggac
gagcagggcaacgtgatcctcaacgcgggtgaggacctgagtgaccccgccatcgagcga
ctcatccaggcgggcatcagcaaggtcaaggtccgcagcgtgctcacctgcgagtcggcg
atgggcgtgtgcgccacctgctacggccgctccatggcgaccggcaagctggtcgacgtc
ggtgaggcagtcggtatcgtcgccgcccagtcgatcggtgaacccggtacgcagctgacg
atgcggacgttccaccagggtggtgtcgccggcgacgacatcaccacgggtctgccgcgt
gtcaccgagctgttcgaggcccgggtgccgaagggcaaggcgccgatcgccgatgtcgac
ggccgggtgcggatcgaggagagcgagcggttctggaagatcacgctcatcccggacgac
ggcagcgaggagatcgtcttcgacaagttgtcgaagcggcagcgactcgcgatcggtccg
aacggcccgctggcggacggcgaccacgtcaaggtcggtcagccgctgctggaaggtacg
ccggacccgcacgaggtgctgcgtgtgatggggccgcgcgaggcgcagatgcacctggtg
gaggaagtccagaaggtgtaccgcgcgcagggtgtgtccatccacgacaagcacatcgag
gtcatcgtgcgccagatgctgcgccgcgtgacgatcatcgattccggttcgaccgagttc
ctgcccggcgaactgcccgaacgctccaagttcgagcaggtcaaccgcaaggcggtggcg
gaaggcggcgaacccgcgtcgggtcgtccggtgctgatgggcatcacgaaggcgtcgctg
accacggactcgtggctgtcggcggcctccttccaggagaccacccgtgtgctcaccgac
gcggccatcaacggccgtagtgacgcgctgatcggtctcaaggagaacgtgatcatcggt
aagttgatcccggcgggtacgggcatcaaccggtaccgcaacatccaggtgcagccgacg
gaggaggccagggtcgccgcctacgcgatcccgtcctacgacgatggctactacacgcct
gacgtgttcggcaccggtaccggcgccgccgtcccgttggacgactacgacttcggtcgc
gacttccggtag

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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