KEGG   Saccharomonospora viridis: Svir_09500Help
Entry
Svir_09500        CDS       T00980                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
svi  Saccharomonospora viridis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:svi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Svir_09500
Enzymes [BR:svi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Svir_09500
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Svir_09500
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
976161..977024
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEVVRAGLEKHVLGRIVSSVEVLHPRAIRRHVLGEADFVGRLVGAKITAVCRRG
KYLWFELADGTAVLAHLGMSGQMLIQPRGVVDEKHLRVRFRFSDDGPELRFVDQRTFGGL
SLTDLVEVEGTVLPSAIAHIARDPLDPLFDVVATARALRTRRTEVKRALLDQTLVSGIGN
IYADEALWRVGLHWARPADRLTATQARGVLAAAAEMMVEALRVGGTSFDALYVNVNGESG
YFSRSLDAYGREGEPCRRCGSLIVREAFTNRSSFSCPRCQPKPRSRR
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctgcctgaggtcgaggttgtacgggccggtcttgaaaagcacgtgctcggg
cggatcgtctcctcggtcgaggtgctgcacccgagggcgatccgtcggcacgtgctcggc
gaggccgatttcgtcggtcgtctcgtcggcgcgaagatcacggcggtgtgccgtcgagga
aagtacctgtggttcgagctggccgacggcacggctgtgctcgcacatctcgggatgagc
ggccagatgctgatccagcctcggggcgtggtcgacgagaaacatctgcgggtgcgcttc
cggttctcagacgacgggccggagttgcggttcgtggatcaacgcactttcggtggtctg
tcgttgacggacctggtggaggtcgagggcacggtgttgccttcggccatagcccatatc
gcgcgtgatccgctggacccgctgttcgacgtcgtggccacggcgcgtgcgttgcggacg
cgtcgtaccgaggtcaagcgcgcgttgctggaccagaccttggtgtccgggatcggcaac
atctatgccgatgaggcgttgtggcgggtcgggttgcattgggcccggcccgcggatcgt
ctcaccgcgacgcaggcccgtggtgtgctggcggccgcggccgagatgatggtcgaggcg
ttacgagtgggcggcacgtcgttcgatgcgctctatgtcaacgtcaacggtgagtcgggg
tacttctcccgatccctcgatgcctacggccgggagggtgagccttgtcgtcgctgcggt
tcgttgatcgtgcgtgaggcgttcacgaaccggtcatccttcagttgtcctcggtgtcag
ccgaagccgcgttcgcggcgttga

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