KEGG T00980: Svir

Saccharomonospora viridis: Svir_14690

Entry

Svir_14690 CDS T00980

Definition

polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)

Orthology

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

svi Saccharomonospora viridis

Pathway

svi00230	Purine metabolism
svi00240	Pyrimidine metabolism
svi03018	RNA degradation

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:svi00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:svi00240]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:svi03018]

SSDB

Motif

Pfam:

RNase_PH PNPase RNase_PH_C S1 KH_1 KH_3 KH_2

Other DBs

NCBI-GI:

257055504

NCBI-GeneID:

8386802

UniProt:

C7MQW3

Position

1515582..1518053

AA seq 823 aa
MTDVSGNDTQAVHETEAVIDNGRFGQRTVRFETGRLARQAAGSVVAYLDDETMVLSATTA
SKQPKEQFDFFPLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTCRLIDRPLRPSFAEG
LRNEIQIVVTVQSLHPDDPYDVLAINAASASTQIAGLPFSGPIGGVRLGLIDGEWVAFPT
WSQLERATFNMVVAGRIVGDRPEDVAIMMVEAEGTENTLDLIANGATAPTEKTVAEGLDA
AKPFIRVLCEAQQRLADVAAKPVGEFPLFPDYEQDAYDAVAAIATDGLAKALTIAGKQER
ENAIDEVKNAVLERVGIGEGEAFEGREKEIGAAFRALTKKLIRQRILRDKVRIDGRGVTD
IRQLAAEVSVVPRAHGSALFERGETQILGVTTLNMLRMEQQLDTLSPETTKRFLHHYNFP
PYSTGETGRVGTPKRREIGHGMLAERALVPVVPKREEFPYAIRQVSEALGSNGSTSMGSV
CASTMSLLNAGVPLKAPVAGIAMGLVSDEVENENGETEVRYVALTDILGAEDAFGDMDFK
VAGTREIITALQLDTKLDGIPSDVLAAALEQARDARLTILDVMAEAIDGPDEMSPYAPRV
TSLKVPVDKIGEVIGPKGKMINSITEETGADISIEDDGTIYVGAADGPSADAAIEKINAI
ANPQLPKVGERYLGTVVKTAAFGAFVSLLPGRDGLVHISKLGNGKRVAKVEDVVHVGDKL
QVEIADIDSRGKISLVLVKDEDEEGEAAESGKGQSSAQEAPERDKPAKAGRGDKGPRPDR
PRQRTRRGGRGRGGERGGRGEKSDQQQSDAKGTASTSGPADLE

NT seq 2472 nt +upstreamnt +downstreamnt
atgactgatgtcagcggcaatgacacacaggccgtgcacgaaacggaagccgtgatcgac
aacgggcggttcggtcagcgcacggtccgattcgagacgggcagactcgcgcgacaggca
gccgggtccgtcgtcgcgtacctggacgacgagacgatggtgctgtccgccaccaccgcg
tccaaacagcccaaggaacagttcgacttcttcccgctgacggtggacgtcgaggagcgg
atgtacgcggccgggcgtatccccggtgcgttcttccgtcgggaaggtcgcccgtccacc
gacgcgatcctgacctgccggctcatcgaccgtcccctgcgtccctcgttcgcggagggg
ctgcgtaacgagatccagatcgtcgtgacggtgcagagcctgcacccggacgacccctac
gacgtgctcgccatcaacgcggcgtcggcttccacccagatcgccggactgccgttctcc
ggccccatcggtggagtgcggctcgggctgatcgacggcgagtgggtcgccttcccgacc
tggtcgcagctggagcgcgccacgttcaacatggtcgtggcgggtcgtatcgtcggggat
cgtcccgaggacgtcgcgatcatgatggtcgaggcggaggggaccgagaacaccctcgac
ctcatcgcgaacggggccaccgcgcccacggagaagaccgtggccgagggcttggacgcg
gccaagccgttcatccgggtgctgtgcgaggcgcagcagcgactcgccgacgtggcggcg
aagccggtgggtgagttcccgctgttcccggactacgaacaggacgcctacgacgcggtc
gcggccatcgcgaccgacggcctcgccaaggcgctcacgatcgcgggcaagcaggaacgc
gagaacgcgatcgacgaggtgaagaacgcggtgctcgagcgcgtcggaatcggcgagggc
gaggcgttcgaaggccgtgagaaggagatcggcgcggcgttccgcgcgctgaccaagaag
ctgatccggcagcgcatcctgcgcgacaaggtgcgtatcgacggccgcggcgtgacggac
atccggcagctggccgccgaggtgtcggtggtgccgagggcgcacggctcggccctgttc
gagcggggcgagacccagatcctgggggtcaccacgctcaacatgctccgtatggagcag
cagctcgacaccctgtcgccggagacgacgaagcgtttcctgcaccattacaacttcccg
ccgtactccaccggggagacgggccgggtgggcacgccgaagcgccgtgagatcggccac
ggcatgctcgccgagcgcgcgctcgtacccgtggtaccgaagcgggaggagttcccgtac
gcgatccggcaggtctccgaggcactgggctccaacgggtccacctcgatgggctcggtg
tgcgcgtccacgatgagcctgctcaacgccggggtgccgctgaaggcgccggtggcgggt
atcgccatggggctggtgtccgacgaggtcgagaacgagaacggggagaccgaggtccgt
tacgtggcgctcaccgacatcctcggtgcggaggacgccttcggtgacatggacttcaag
gtcgcgggcaccagggagatcatcaccgcgctgcagttggacacgaagctcgacggcatt
ccgtccgacgtgctcgccgcggcgctggagcaggcccgggacgctcgactgacgattctg
gacgtcatggccgaggccatcgacggtccggacgagatgagcccgtacgcaccgcgcgtg
acgagcctgaaggtgccggtcgacaagatcggcgaggtcatcggcccgaagggcaagatg
atcaactcgatcaccgaggagaccggtgccgacatctccatcgaggacgacggcacgatc
tacgtcggtgccgccgacggcccctcggccgacgctgccatcgagaagatcaacgccatc
gccaacccgcagctgccgaaggtcggtgagcggtacctcggcaccgtggtgaagacggcg
gcgttcggtgcgttcgtgtcgctgctgcccggcagggacggcttggtgcacatctccaag
ttgggcaacggcaagcgcgtggccaaggtcgaggacgtggtgcacgtcggcgacaagctg
caggtggagatcgccgacatcgacagccgcggcaagatcagcctcgtgctcgtcaaggac
gaggacgaggaaggagaggccgccgagtccggcaaggggcagtcctcggctcaggaagcc
cccgaacgggacaagcccgcgaaggcgggtaggggcgacaaggggccgaggcctgaccgg
ccgcgtcagcgcacccgtcgtggcggacgtggccgtggcggcgagaggggcggtcgcggt
gagaagtcggaccagcagcagtccgacgcgaagggcaccgcctcgacgagcggcccggcc
gacctggagtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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