KEGG   Streptomyces violaceusniger: Strvi_1925Help
Entry
Strvi_1925        CDS       T01602                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
svl  Streptomyces violaceusniger
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:svl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Strvi_1925
Enzymes [BR:svl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Strvi_1925
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Strvi_1925
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1837143..1838075
Genome map
AA seq 310 aa AA seqDB search
MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG
KYLWLPFDDDAAAEAVLAHLGMSGQLLVQPAEAPDEKHLRIRVRFADAAGTELRFVDQRT
FGGLSLHDTVPGDLEGLPDAIAHIARDPLDPAFDEAAFHTALRRRRTTIKRALLDQSLIS
GVGNIYADEALWRARLHYDRPTATLARPRAAELLGHVREVMTAALAVGGTSFDSLYVNVN
GESGYFERSLDAYGRENEPCRRCGTAMRRRPWMNRSSYFCPRCQRPPRPAIVARPASRLA
ASPLSARAVS
NT seq 933 nt NT seq  +upstreamnt  +downstreamnt
ttgcccgagctgcccgaggtcgaggtggtccgccgcggactggagcgctgggtcagcggc
cgtacggtcgccgaggtccaggtgctgcatccgcgcgcggtccgtcgccacctcggcggc
ccggaggacttcgcggcccggctcaggggccgccgcaccgggatcgtccgccgccgcggc
aagtacctgtggctgccgttcgacgatgacgccgccgccgaggcggttctggcccatctc
gggatgagcgggcagctcctggtccagccggccgaggcccccgacgagaagcatctgcgc
atccgggtccgcttcgccgatgccgcgggcaccgagctgcgcttcgtcgaccagcgcacc
ttcggcgggctctcgctgcacgacaccgtccccggcgacctggaggggctgccggacgcc
atcgcgcacatcgcccgcgacccgctggaccccgccttcgacgaggcggccttccacacc
gcgctgcgccgccgccgcaccaccatcaagcgcgccctgctggaccagtcgctgatcagc
ggggtcggcaacatctacgccgacgaggcgctgtggcgcgcccggctgcactacgaccgg
ccgaccgcgaccctcgcccgcccgcgcgccgccgaactcctcggccatgtgcgcgaggtg
atgaccgcggcgctggccgtcggcggcaccagcttcgacagcctctacgtcaatgtgaac
ggcgagtccggctacttcgagcgctcgctggacgcgtacggccgggagaacgagccgtgc
cgccgctgcggcaccgcgatgcgccgccgcccctggatgaaccgctccagctacttctgc
ccgcgctgtcagcgcccgccgcgcccggccatcgtggcccggccggcatcccgcctggcc
gcctcgccgctctcggcgcgcgccgtgtcgtag

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