KEGG T01602: Strvi

Streptomyces violaceusniger: Strvi_2875

Entry

Strvi_2875 CDS T01602

Definition

glycoside hydrolase clan GH-D

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

svl Streptomyces violaceusniger

Pathway

svl00052	Galactose metabolism
svl00561	Glycerolipid metabolism
svl00600	Sphingolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:svl00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:svl00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:svl00600]

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_31 DUF187 Glyco_hydro_97

Other DBs

NCBI-GI:

345010500

NCBI-GeneID:

11084652

UniProt:

G2PCU8

Position

2962020..2964131

AA seq 703 aa
MIETGGSGRLWVLSGRHSSYALYVTDRDELLHLHWGPRIAVEDAEALAAEPGPPERPFES
PLDGREEYPVEGGPRFVRPALSVHAGGVRGTEWRFSSGTVLDPGTGQELRLRFHDPLHHL
DITLHYRMRDDGDVIERWTTLTHTGNAGQEPVELLRADSAAWSLPARDRWRLSHLHGRWA
AESRLARTELTPGEKVIGSRRGHTSHHHLPWIALDGGEATEESGEVHSGALAWSGAWRIA
VQRLADGAVQAVGGVGHDDAGQLLLAPGESFTTPVFAGLWTDGGFGAASRAWHAWQLARV
VPGADRSRPVLYNSWEATEFEVSEEQQRSLAQLAATMGVELFVVDDGWFGARTSDRAGLG
DWTANPDRFPHGLKPLADEVHALGMQFGIWVEPEMVNPDSDLYRAHPDWVQHHPGRARAA
FRNQLVLNLARPEVRAYLWERLDTLLSGAPVDYVKWDFNRSFSDAGWPGDAYPRRLWIDH
VRGLYELLERLRAAHPQVAFESCSGGGGRIDLGILGRTDQVWTSDNTDPLDRLAIQHGFS
QLHPARVMAAWVTDSPNAMGNARVSSLRFRFVSAMAGVLGVGGDLTRWSEAELAEARDWV
ALYKRVRPVVQHGELYRLRPPEGDGLSAVQYVRGEETVVLAWIQAQHYGDAQPPLRLRGL
DPAATYRDLETGEVHRGAVLAHRGLRTGLGGDLDAAVFHLRRN

NT seq 2112 nt +upstreamnt +downstreamnt
atgatcgaaaccggtggaagcggtcggctctgggtgctctcggggcggcacagcagctat
gccctgtacgtcaccgaccgtgatgaactgctccatctccactgggggccgaggatcgcg
gtcgaggacgccgaggccctcgccgccgagcccgggccgccggagcggccgttcgaatca
ccgctggacgggcgggaggagtaccccgtggagggcggcccgcgtttcgtccgccccgcc
ctgtccgtacacgccgggggcgtacgcggcaccgagtggcgcttcagcagcggcaccgtc
ctggaccccggcaccggccaggagctgcggttgcgcttccacgatccgctgcaccacctc
gacatcaccctccactaccggatgcgggacgacggcgatgtcatcgagcgctggaccacc
ctcacccacaccggcaacgccggccaggagcccgtggagctgctgcgcgccgactccgcc
gcctggtcgctcccggcgcgcgaccgctggcggctgtcccatctgcacggccgctgggcc
gccgagagccggctggcccgcaccgaactcacccccggtgagaaggtgatcggcagccgc
cggggccacaccagccaccatcatctgccctggatcgccctggacggcggggaggccacc
gaggagagcggcgaggtgcacagcggcgcgctcgcctggtccggggcctggcggatcgcc
gtccagcggctggccgacggcgccgtccaggcggtcggcggagtcggccacgacgacgcg
gggcagctactcctcgcgcccggcgagtcgttcaccacccccgtcttcgcggggctgtgg
accgacggcggcttcggtgccgccagccgcgcctggcacgcctggcagctcgcccgggtg
gtccccggcgccgaccggtcccggccggtgctctacaactcctgggaggccaccgagttc
gaggtgagcgaggaacagcagcgctcgctcgcgcagttggccgccaccatgggcgtcgag
ctgttcgtcgtcgacgacggatggttcggggcgcgcaccagcgaccgggccgggctcggc
gactggacggccaacccggaccgctttccgcacgggctcaaaccgctggccgacgaggtg
cacgcgctggggatgcagttcggcatctgggtcgagcccgagatggtcaaccccgacagc
gacctctaccgcgcccaccccgactgggtgcagcaccaccccggccgggcccgcgccgca
ttccgcaaccagctcgtgctcaacctcgctcgccccgaggtgcgcgcgtacctgtgggag
cggctggacaccctgctgagcggcgcccccgtcgactatgtgaaatgggacttcaaccgc
tccttctcggacgccggctggcccggcgacgcctatccgcggcggctgtggatcgaccac
gtacgcgggctgtacgagctgctggagcggctgcgcgcggcacacccccaggtcgccttc
gagtcctgctcgggcggtggcggccggatcgacctgggcatcctgggccgcaccgaccag
gtgtggacctcggacaacaccgacccgctggaccggctggccatccagcacggcttcagc
cagctccacccggcccgggtgatggccgcctgggtcaccgacagccccaacgccatgggc
aacgcacgcgtcagctcgctgcgcttccgcttcgtcagcgcgatggccggggtgctgggc
gtcggcggcgatctgacccgctggagcgaggcggaactggccgaggcccgcgactgggtg
gcgctctacaagcgggtgcgcccggtcgtccagcacggtgagctgtaccggctgcggccg
ccggagggcgacgggctcagcgcggtgcagtacgtacggggcgaggagaccgtggtgctg
gcctggatccaggcgcagcactacggcgacgcacagcccccgctgcggctgcgcgggctc
gacccggcggccacctaccgggacctggagaccggggaggtgcaccggggagcggtactc
gcgcaccggggcctgcgcaccgggctgggcggcgacctcgacgccgccgtattccacctt
cgccgaaactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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