KEGG   Shewanella violacea: SVI_0052Help
Entry
SVI_0052          CDS       T01206                                 

Gene name
fadB-1
Definition
fatty oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
svo  Shewanella violacea
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:svo00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    SVI_0052 (fadB-1)
   01212 Fatty acid metabolism
    SVI_0052 (fadB-1)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    SVI_0052 (fadB-1)
   00650 Butanoate metabolism
    SVI_0052 (fadB-1)
  Lipid metabolism
   00071 Fatty acid degradation
    SVI_0052 (fadB-1)
   01040 Biosynthesis of unsaturated fatty acids
    SVI_0052 (fadB-1)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    SVI_0052 (fadB-1)
   00310 Lysine degradation
    SVI_0052 (fadB-1)
   00380 Tryptophan metabolism
    SVI_0052 (fadB-1)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    SVI_0052 (fadB-1)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    SVI_0052 (fadB-1)
   00281 Geraniol degradation
    SVI_0052 (fadB-1)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    SVI_0052 (fadB-1)
Enzymes [BR:svo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     SVI_0052 (fadB-1)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     SVI_0052 (fadB-1)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     SVI_0052 (fadB-1)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     SVI_0052 (fadB-1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(53394..55547)
Genome map
AA seq 717 aa AA seqDB search
MIYQSPTIQVELLEDNIARLCFNAPGSVNKLDRETINSLNAALDAIQQNSDIQALVLTSG
KGAFIVGADITEFLGLFAQDDSVLLPWIAEANVVFNKLEDLPFPTISAINGFALGGGFET
VLATDFRIADTTARVGLPESKLGLVPGFGGTVRLPRLIGADNALEWITSGKDQRPEAALK
VGAIDAIVAPENLQASAIQMLKDAVAEKLDWQTRRARKQAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMTAISVIEKAANLGRDEALKIEHQAFVKLAKTDVTQALIGIFLNDQLVK
GKAKKAGKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEASKLL
AAQIKRGRSTPEKMAKVLNNITATLDYAPVKDVDLVVEAVVEHPKVKSMVLAEVEQHVAD
DAIITSNTSTISINLLAKALNKPERFCGMHFFNPVHKMPLVEIIRGENSSEETIATVVAY
ASKMGKTPIVVNDCPGFFINRVLFPYFAGFCGLLADGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKDGKDAIDIMFGAERFGQKNSKGFYAYSVDRRGKP
KKDVDAVSYELLGAEFGELKQFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQSK
NT seq 2154 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacgattcaggttgagttacttgaagataatatcgctcggcta
tgctttaacgcaccgggttcagtcaacaagttagatagagaaacgattaactctcttaac
gctgcactcgatgcaatccagcaaaattcagacatccaagctctagtcctgacttcaggt
aaaggcgccttcatcgttggcgccgacatcactgaattcttaggcttgttcgcccaagac
gatagtgtgctactcccttggatagctgaagcgaatgtcgtatttaataagttagaagat
cttccctttccaactatctcagccatcaacggctttgcactaggtggcggtttcgaaacc
gtactagctaccgacttccgtattgccgataccacagcaagagtgggattacctgagtct
aagctaggactggttccaggttttggaggcacggttcgcttgccacgtctaatcggtgcg
gataacgcgctcgagtggatcactagcggtaaagaccaacgtccggaagcggcgcttaaa
gtcggcgctatcgacgcaatcgttgccccagaaaatttacaagcttcagccattcagatg
ctcaaggatgcagtcgcagaaaaactcgattggcagactcgccgcgctcgaaagcaggct
ccactgacactgcctaagctagaagccatgatgtcattcgccactgccaaaggcatggtt
ttcaagatagcgggcaagcattacccggcacctatgacagccatcagcgtcatagaaaaa
gccgctaaccttgggcgagatgaagcccttaagatagaacatcaggcctttgttaagctg
gccaagacagatgtgactcaggcattgatcggtatcttcctcaatgatcagctagtaaaa
ggtaaggctaagaaggccggtaaactggctaagaaagtcgacacggctgccgtactaggt
gcaggcatcatgggtggcggtatcgcctaccagagtgccagtaaaggcactcctatcgtc
atgaaagatattgcacagccagctctggacttaggtctgggtgaagcatctaagctgctt
gcagcgcaaattaaacgtggtcgctctacaccagagaagatggctaaggtacttaacaac
atcacagcgactctggactatgctccggtcaaagatgtcgaccttgtcgtcgaagccgtt
gtcgagcaccctaaagtcaaatctatggtactggccgaagttgagcagcatgttgccgac
gacgccatcatcacctctaatacatctaccatctcgataaacctgctagctaaggcgcta
aacaagcctgagcgtttctgtggcatgcacttcttcaacccggtacataagatgccactg
gttgaaattattcgtggtgagaacagctcggaagagacgattgcgactgtagtcgcttac
gccagcaagatgggtaagacacctatcgtagttaatgattgtcctggcttcttcattaac
cgtgtgctgttcccttactttgcaggtttttgtggcctactcgccgatggcggtgatttc
gccgctatcgataaggtaatggaaaaacagtttggttggcctatgggcccagcataccta
ctggatgttgtcggtttagacacgggtcatcacgcacaggccgttatggctgaaggcttc
ccggatcgcatggcgaaagatggcaaagatgctatcgatatcatgttcggagctgaacgc
ttcggtcagaagaacagcaaaggtttctatgcttactctgtcgaccgtcgtggcaagccg
aagaaagatgtcgatgccgttagctatgaactgctaggtgccgaatttggcgaacttaag
caattcgagtccgatgagatcatcgcccgcactatgatccctatgatcatagaaaccgtg
cgttgtctcgaagaaggcattatcgcttcacctgctgaagcggatatgggtctggtttac
ggtctaggtttcccaccattccgaggcggtgtattccgctatatagataccatgggcgtc
gcaaacttcgtcgctctcgccgataaatatgctcacttaggtggcctatatcaagtaaca
gatgccatgcgtgaacttgccgcaaacaatggcagctactaccagtctaaataa

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