KEGG   Shewanella violacea: SVI_1471
Entry
SVI_1471          CDS       T01206                                 
Symbol
gmd-1
Name
(GenBank) GDP-mannose 4,6-dehydratase
  KO
K01711  GDPmannose 4,6-dehydratase [EC:4.2.1.47]
Organism
svo  Shewanella violacea
Pathway
svo00051  Fructose and mannose metabolism
svo00520  Amino sugar and nucleotide sugar metabolism
svo00541  O-Antigen nucleotide sugar biosynthesis
svo01100  Metabolic pathways
svo01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00051 Fructose and mannose metabolism
    SVI_1471 (gmd-1)
   00520 Amino sugar and nucleotide sugar metabolism
    SVI_1471 (gmd-1)
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SVI_1471 (gmd-1)
Enzymes [BR:svo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.47  GDP-mannose 4,6-dehydratase
     SVI_1471 (gmd-1)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 adh_short 3Beta_HSD
Other DBs
NCBI-ProteinID: BAJ01442
UniProt: D4ZIE3
Position
1684836..1685963
AA seq 375 aa
MSKNKVALITGVTGQDGSYLAELLLEKGYEVHGIKRRASSLNTERVDHIYQDSHQENQKF
FLHYGDLTDSSNLTRILKEVQPDEVYNLGAQSHVAVSFECPEYTADVDAMGTLRLLEAIR
FLGLEKKTKFYQASTSELYGEVQEIPQKETTPFHPRSPYAVAKMYAYWIVVNYRESYGMY
ACNGILFNHESPRRGETFVTRKITRAIANISQGLEKCLFLGNMDALRDWGHAKDYVRMQW
MMLQQETADDFVIATGKQISVREFVTLSAKEAGIELEFTGEGLDEVATITAITGNDAPAL
KVGDVIVKVDPRYFRPAEVETLLGDPTKAKEKLGWVPQITVEEMCAEMVENDLNKAKQHA
ILKEHGYNITVTVES
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgtcaaaaaataaagttgcgttaattaccggtgttactggtcaagatggttcttacctt
gcagagcttttacttgaaaaaggatatgaggttcatggaattaaacgccgtgcatcttca
ttgaataccgagcgtgttgatcatatataccaagatagtcatcaggaaaatcaaaagttt
ttcttgcattatggtgatttaacagatagttcaaacctaacccgcatcttaaaggaagtg
cagcctgatgaggtttataacttaggtgcgcaatcgcatgtagcagtttcctttgagtgc
cctgaatataccgcggatgttgatgcaatgggcacacttcgtctattagaagctattcgc
ttcttaggactagaaaagaaaacaaaattctaccaagcatctacttcagagctatatggt
gaagtacaagagattccacaaaaagaaacaacaccatttcacccgcgctcaccttatgct
gttgctaaaatgtacgcctactggatagtagtaaattatcgcgagtcttatggtatgtat
gcctgtaatggaattttatttaaccatgagtcgcctcgacgtggtgaaacctttgtaaca
cgtaaaattacccgtgcaatagcaaatatttcacaagggttagagaaatgtttgtttcta
ggtaatatggatgctctgcgtgactggggtcatgcaaaagattatgtgcgtatgcaatgg
atgatgttacaacaagaaactgctgatgattttgttattgcaacaggcaagcaaatttct
gtacgcgaatttgttacattatcagcaaaagaagcaggtattgaacttgagttcacaggt
gaaggacttgatgaagttgccacgataactgccattacagggaatgatgcaccagcatta
aaagtaggtgatgtgattgttaaagttgatccacgttacttccgtcccgcagaagttgaa
actctattaggtgatccaacaaaagcaaaagaaaaacttggttgggttccacagataact
gttgaagaaatgtgtgccgaaatggtagaaaatgacttaaataaagctaaacaacacgcg
attttgaaagagcacggttacaatataactgtgacggttgaaagttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (72)   

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