KEGG T01206: SVI

Shewanella violacea: SVI_1824

Entry

SVI_1824 CDS T01206

Gene name

icd

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

svo Shewanella violacea

Pathway

svo00020	Citrate cycle (TCA cycle)
svo00480	Glutathione metabolism
svo01100	Metabolic pathways
svo01110	Biosynthesis of secondary metabolites
svo01120	Microbial metabolism in diverse environments
svo01210	2-Oxocarboxylic acid metabolism
svo01230	Biosynthesis of amino acids

Module

svo_M00009	Citrate cycle (TCA cycle, Krebs cycle)
svo_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:svo00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:svo00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

294140595

NCBI-GeneID:

8969075

UniProt:

D4ZJE6

Position

2098052..2100277

AA seq 741 aa
MTDKSSTIIYTETDEAPALATLSLLPIIKTFTQAAGINVETRDISLSGRIISLFPEQLSD
SQKIADALAELGELAGKPEANIIKLPNISASVPQLKACILELQQKGYDIPSYPDEPTNAA
EEDVKARYDKIKGSAVNPVLREGNSDRRAPGSVKKYAQKHPHSMGAWSKDSKTHVAHMNE
GDFYGSEKSVTLTEATQVSIVLKTKEGGEQVLKTALPLKAGEVIDASVMSKQALLAFFER
ETQDAKAQGVLLSLHLKATMMKVSDPILFGHAVKVYYKELFAKHSSLFEELGVDVNNGLG
DVYAKISTLPAEQKAAIEADIAAIYLTRPELAMVDSDKGITNLHVPSDVIIDASMPAAIR
TSGMMWGPDGQPQDTKAMIPDRCYAGVYQETIQFCKENGAFDPTTMGSVPNVGLMAQKAE
EYGSHDKTFEISASGSMNVIDANGNTLLSHDVEAGDIWRMCQVKDAPIQDWVKLAVKRAR
LSNTPAVFWLDEQRAHDAEIIKKVNQYLKDHDTKGLDIRILSPIDATRFTLQRTKDGLNT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTTDNAKAQVLADTLDVAIGQFLDENKSPSRRVGQLDNRG
SHFYLAMYWAQAVVAQSQDAELKAQFAELARALASNEDKIVAELNSAQGAPVDLGGYYRL
DPVKAAAEMRPSATLNALFTA

NT seq 2226 nt +upstreamnt +downstreamnt
atgaccgacaaatcatcaacaattatttatactgaaacagacgaagcccccgcgttagcg
accctgtctctgttacctattatcaagacgtttactcaagcggctggtatcaatgttgaa
acccgtgacatctcattatcgggtcgcatcatttcactatttccagaacaactgagtgat
tcacaaaaaattgccgatgcactggctgaactgggtgaacttgcgggtaagcccgaagcc
aacatcattaagcttcccaatatcagtgcctcagtgccgcagctaaaagcctgtattcta
gagcttcaacagaaaggctatgatattccttcatatcccgatgagccgactaatgcagca
gaggaagatgttaaagcccgttacgataagattaaaggcagcgccgtcaacccagtacta
cgtgaaggtaactctgatcgtcgtgcgccaggctcagttaaaaaatatgctcagaagcat
ccgcactctatgggagcttggtctaaagactctaagactcacgtagcacatatgaatgag
ggtgacttctacggcagtgaaaaatcagtcactctgacagaggcaactcaagtcagtatc
gtccttaagacgaaagagggtggtgagcaggtacttaagactgcacttcctttgaaagcg
ggcgaagtgatcgatgcttcagtgatgagtaaacaggcattactcgcgtttttcgagcgt
gagactcaagatgctaaagcccaaggcgtgctactttctttgcatttgaaagctaccatg
atgaaagtatcggatcctatcctcttcggtcatgcggttaaggtctactacaaggaattg
tttgctaagcattcaagcctatttgaagagctgggtgtcgatgtgaacaatggtctgggt
gacgtatacgccaagataagcacattaccagcggagcaaaaagccgcgatagaagccgac
atagcggccatctatctgactcgccctgaactggctatggtggattcagataagggtatc
actaacttgcatgtgcctagtgatgtgatcatagatgcgtctatgcctgctgccattcgc
acctcaggtatgatgtggggacctgatggtcagcctcaagatactaaggctatgatcccg
gatcgttgctatgccggtgtatatcaggaaactatccaattctgtaaagaaaatggtgcc
ttcgatccaaccacaatgggcagtgtgccaaatgtgggcttgatggctcagaaagccgaa
gagtatggtagccacgataaaacattcgaaatttctgcatcaggcagcatgaatgttatc
gatgctaacggaaacacgcttctttcccatgatgtagaagcgggtgatatctggagaatg
tgtcaggttaaagacgcgcctattcaggattgggttaaattagcagtcaagcgtgcacgt
ttatcgaatacaccggcggtattctggttagatgagcaacgtgcacacgatgctgaaatc
attaagaaagtgaatcagtatcttaaagatcacgacaccaagggtctggatattcgtatc
ttgtctcctatagatgccacacgtttcaccctgcaacgcacaaaagatggcttaaatact
atttctgtcacgggtaacgttctgcgtgattacctaacggatctgttccccattcttgag
ttgggtaccagtgctaagatgctctctatcgttcctttgatgaatggtggtggtctgttt
gagactggtgcgggcggaagtgcgcctaagcatgtacaacaggttgaaaaggaaggccac
ctgcgttgggattcattaggtgagtttctggctttggctgcatccttagagcatctgagt
cagactactgacaatgctaaggcgcaggtattggctgatacactggatgtggctatcgga
cagtttctcgatgaaaacaagtcaccttctcgtcgagtaggccagttagataaccgcggc
agtcatttctatcttgccatgtattgggctcaggctgtcgttgctcagtcacaagatgct
gaacttaaggcgcagtttgctgaactagcgagagccttggctagcaatgaagacaagatt
gttgctgagttaaattcggcccaaggtgctccagtcgatctaggaggatactatcgttta
gatcctgttaaggctgctgccgagatgcgtccaagcgcgactctaaatgccttgtttact
gcttag

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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