KEGG   Shewanella violacea: SVI_1933Help
Entry
SVI_1933          CDS       T01206                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
svo  Shewanella violacea
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:svo00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SVI_1933 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    SVI_1933 (dapE)
Enzymes [BR:svo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     SVI_1933 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(2219370..2220500)
Genome map
AA seq 376 aa AA seqDB search
MSQDVLTLAQDLISRPSVTPLDEGCQQLMADRLAKAGFDIEPMVFEDTTNMWARRGTEKP
LFCFAGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMLVATERFVEKNP
DHKGSIAFLITSDEEGPFINGTTRVIDTLEARDEKITWSLVGEPSSTHKLGDIVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHKAMPALDELAKMHWDKGNEYFPPTSFQIANINGG
TGASNVIPGALEVMFNFRYSTEVTADILIQRVLNILDAHGLEYDISWVYNGLPFLTGDGP
LLDATREAIKQVTGTDTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVDDI
EQLALCYEVILEKLLC
NT seq 1131 nt NT seq  +upstreamnt  +downstreamnt
atgagtcaggatgtattaaccctagcgcaagatcttatctctcgcccctcagtcacacca
ctagacgaaggctgtcagcagttaatggccgacaggttagctaaagcaggcttcgatatt
gagcctatggtgtttgaagataccaccaacatgtgggccagacgcggcactgaaaagccg
ctattttgcttcgctggccataccgatgtggtgccagtgggcgatctcaatcgctggcac
acaccgcccttcgagcctgtggttatcgatggctatctccacggacgcggcgccgccgat
atgaagggctcactggccgccatgttggtcgcgaccgaacgcttcgtcgagaaaaacccg
gatcataaaggctccatcgccttcttgatcaccagtgacgaagagggacctttcatcaac
ggtaccactcgcgtcatcgacaccttagaggcccgagatgagaagataacttggtctctg
gtcggtgagccgtcttcgactcataaactcggtgatatcgtcaaaaatggtcgccgaggc
agcctcacgggtaacttaaccgtcaatggcattcagggccatgtggcctaccctcacctt
gcggacaatcctatccataaggcgatgccggctttagatgaattggccaagatgcattgg
gacaagggcaatgaatatttcccgcccaccagcttccagatagccaatatcaatggcggt
acaggtgcatcgaatgtgatccctggggcattagaagttatgtttaacttccgatattcc
accgaggtcaccgccgatattcttatccaacgtgtgctcaatatcttagatgcccatgga
ttagaatacgatatcagctgggtctacaacggcctgccatttctcaccggtgacgggcct
ctgctggacgcgaccagagaagccatcaagcaagtcactggcacagatacagatccacaa
accacaggtggtacatctgatggacgctttatcgcgccaaccggcgcacaagtcatagaa
ctgggtccagttaatgccactattcacaaagtgaatgagtgcgtaaaagtggatgatatc
gaacaactagcactttgctatgaagttatattggaaaaattactttgctaa

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