KEGG   Shewanella violacea: SVI_2028
Entry
SVI_2028          CDS       T01206                                 
Name
(GenBank) HD domain protein
  KO
K08722  5'-deoxynucleotidase [EC:3.1.3.89]
Organism
svo  Shewanella violacea
Pathway
svo00230  Purine metabolism
svo00240  Pyrimidine metabolism
svo01100  Metabolic pathways
svo01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:svo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SVI_2028
   00240 Pyrimidine metabolism
    SVI_2028
Enzymes [BR:svo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.89  5'-deoxynucleotidase
     SVI_2028
SSDB
Motif
Pfam: YfbR-like HD_3 HD HDOD OS-D
Other DBs
NCBI-ProteinID: BAJ01999
UniProt: D4ZK00
Position
complement(2335995..2336582)
AA seq 195 aa
MSHLFAHLARMKLIQRWPLMYNIRSENVQEHSLQVAMVAHSLAIIGNKKFGKSLSPDRAT
TVAIFHDASEIITGDLPTPVKYFNKEIEAEYKKIEAIAENRLLEMVPEEFKSEYASLLTS
EHADIEYKTLVKSADTICAYLKCLEEHRAGNHEFNTAKKRIEKSLKDNPDPAVQYFIDCF
IPSFKLNLDDINQLL
NT seq 588 nt   +upstreamnt  +downstreamnt
atgagtcatctctttgctcaccttgctcgcatgaaattaattcaacgctggcccttgatg
tataacattagaagtgaaaacgtacaggagcattctcttcaagtagccatggtcgcgcac
agcctggccatcataggcaataaaaaatttggtaagtcactctcccctgacagagcgaca
acggttgccatttttcatgatgccagtgagatcatcacaggggatctgcccacgccggtt
aaatacttcaataaagagatagaggctgaatacaaaaaaattgaagccattgccgaaaac
aggttactggagatggttccagaagaatttaaatcagagtatgccagcttactcaccagc
gagcatgccgatattgaatataagaccttggtcaaatccgccgatacgatttgtgcttat
cttaaatgcttagaagagcatagagccggcaatcatgagtttaatactgctaaaaaacgg
atcgagaaatccctaaaagataaccctgatcccgccgtacaatactttatcgattgtttc
atcccgagtttcaaattaaatttagacgatatcaaccagttactctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (8)   
   KEGG ENZYME (1)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system