KEGG   Shewanella violacea: SVI_2074
Entry
SVI_2074          CDS       T01206                                 
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
svo  Shewanella violacea
Pathway
svo03010  Ribosome
Brite
KEGG Orthology (KO) [BR:svo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    SVI_2074 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:svo03011]
    SVI_2074 (rpsA)
Ribosome [BR:svo03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    SVI_2074 (rpsA)
  Bacteria
    SVI_2074 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB
Other DBs
NCBI-ProteinID: BAJ02045
UniProt: D4ZK46
Position
2387250..2388917
AA seq 555 aa
MTESFADLFEESLATLEFRPGSIVTGVVVRIENGTVLVDAGLKSESPIPAEQFKNAQGEL
EVSVGDTVHVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGVINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLENKDLEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
IDVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKVNPWDDFAER
FNKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVADYKKGDEINAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGAVVHGTVVAVDAKGVTIELAETVEGYLRV
SDISRERIEDASTVYSVGDAVESKFMGVDRKNRTISLSIRAKDEAEEKEAMASLNKQEDA
VMSSAMAEAFKAARK
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgactgaatcttttgctgatctatttgaagaatcccttgcaactttggagttccgtcct
ggttctatcgtaaccggtgttgttgttcgcatcgaaaacggtactgtactagttgacgct
ggtctaaagtctgaaagcccaatcccagctgaacagttcaagaacgctcaaggcgaactt
gaagtttctgttggtgatactgtgcacgttgcgcttgactctgttgaagatggcttcggt
gagactcaactgtctcgcgagaaggctaagcgtcacgaagcttggattgttctagaaaaa
gcgtacgaagatgctgaaactgtaatcggtgtcatcaatggtaaggttaaaggcggtttc
actgttgaattaaacggtatccgtgcattcctaccaggttctctagttgacgttcgccct
gttcgcgatactgctcacctagaaaacaaagatctagaattcaaagttatcaaactagac
cagaagcgcaacaacgttgttgtttctcgtcgtgctgttatcgaatctgaaagcagtgca
gagcgtgatgctcttcttgagaacttgcaagaaggtcaggctattaagggtatcgttaag
aaccttactgactacggcgcattcgttgacttaggtggcgttgatggtcttctacatatc
acagatatggcttggaagcgtgttaagcacccatctgaaatcgtcaacgttggtgacgaa
atcgacgttaaagtacttaagtatgaccgtgagcgcacacgtgtttcactaggtcttaag
caacttggcgaagatccttggttagaaatcagcaagcgctacccagaaaacacacgtttg
actggtcgcgttactaatctaactgactacggttgtttcgtagaaattgaagaaggcgtt
gaaggtctagttcacgtttctgaaatggattggactaacaagaacatccacccatctaag
gttgttaacctaggtgatgaagtagaagttctagttcttgacatcgatgaagaacgtcgt
cgtatttctcttggccttaagcagtgtaaagttaacccgtgggatgacttcgcagagcgc
tttaacaagggtgacaaagtcactggtaagatcaagtcaatcactgacttcggtatcttc
atcggtcttgacggcggcatcgacggtctagttcacctttctgatatctcttggaatggt
acaggcgaagaagccgttgctgactataagaaaggcgacgaaatcaacgcagtagttctt
tctgttgaccctgagcgtgagcgtatcagcctaggcgttaagcagactgaagacgatcca
ttcaatgcttatcttgctgataagaagaagggtgcggttgttcacggtacagttgtcgct
gttgacgctaaaggcgttactatcgaacttgctgaaactgttgaaggttacctacgtgta
tctgatatctctcgtgagcgtatcgaagatgcatctacagtttactctgtaggcgacgct
gttgaatctaagttcatgggtgttgaccgtaagaaccgtactatcagcctatctatccgt
gcgaaagatgaagctgaagagaaagaagcaatggctagcttgaacaagcaggaagacgct
gtgatgagcagtgctatggctgaagcgttcaaagcggctcgtaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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