KEGG   Shewanella violacea: SVI_2807Help
Entry
SVI_2807          CDS       T01206                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
svo  Shewanella violacea
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:svo00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SVI_2807 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SVI_2807 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SVI_2807 (trpB)
Enzymes [BR:svo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SVI_2807 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3181436..3182662
Genome map
AA seq 408 aa AA seqDB search
MTKLDPYFGEYGGMYVPQILVPALKQLETAFIEAQEDEAFQAEFSDLLKNYAGRPTALTL
TRNLSPNPLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATAL
ACALLGLKCKVYMGAKDIERQSPNVFRMKLMGAEVIPVTSGSSTLKDACNEAMRDWSGSY
EKAHYLLGTAAGPHPFPTIVREFQRMIGEETKKQLFEREGCLPDAVIACVGGGSNAIGMF
ADFIDEESVQLIGVEPAGLGIDTPMHGAPLKHGKTGIFFGMKAPLMQDSEGQIQESYSIS
AGLDFPSVGPQHAHLAATGRATYESATDDEALDAFQLLARCEGIIPALESSHAIAYALKF
AEKATKETILVVNLSGRGDKDIFTVADILEKREKAQLTADKESGDDRI
NT seq 1227 nt NT seq  +upstreamnt  +downstreamnt
atgaccaaactcgacccctacttcggcgaatatggcggtatgtacgtaccgcagatatta
gtgcctgcactgaaacagctagaaaccgcgtttattgaagctcaagaagatgaggccttt
caagccgaattcagcgacctgttgaaaaactatgccggtcgtccgacggcgctgaccttg
acccgtaacttgagtccgaacccactggtaaaaatctacctcaagcgtgaagacttgctt
cacggaggtgctcacaagaccaaccaggtcttaggccaggccctgcttgccaagcgcatg
ggtaagaaagagatcatcgccgaaactggcgcgggtcaacacggtgtagcaaccgctctc
gcctgtgccctgttaggccttaagtgcaaggtctacatgggcgctaaagacatagaacgt
cagtctcctaacgtgtttagaatgaagctaatgggcgcggaagtgattccggtcacctct
ggttcatcgacccttaaagatgcctgtaacgaagccatgcgcgactggtctggtagctat
gaaaaagctcactatctgctgggtactgccgcaggcccacatcccttccccactatagtg
cgtgaatttcagcgcatgataggcgaagagactaagaagcagctgtttgaacgtgaaggt
tgtctgcccgacgcagttatcgcctgtgtcggtggtggctcgaacgccatcggcatgttt
gccgacttcatcgatgaggaaagcgtacaacttatcggtgttgagcctgctggcctaggt
atcgatactcctatgcatggtgcgccccttaaacacggcaagacaggtatcttcttcggc
atgaaagcgccactgatgcaggacagcgaaggtcagatccaggagtcttactctatatcg
gcaggactcgacttcccatctgtgggtcctcagcatgcacatcttgcggctactggccgt
gcaacttacgagtcggcaaccgatgatgaggcactggacgccttccagctactggctcgt
tgtgaaggaattattcctgcacttgagtcatcacacgccatcgcttatgcactcaagttt
gccgaaaaagccaccaaggaaaccatcttagtggtaaatctatcgggccgcggtgataaa
gatatcttcaccgttgcggatattctggaaaagcgcgagaaagcgcaactaacagcagat
aaggagagcggcgatgaccgaatctaa

DBGET integrated database retrieval system