KEGG   Shewanella violacea: SVI_2808Help
Entry
SVI_2808          CDS       T01206                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
svo  Shewanella violacea
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:svo00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SVI_2808 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SVI_2808 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SVI_2808 (trpA)
Enzymes [BR:svo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SVI_2808 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3182649..3183467
Genome map
AA seq 272 aa AA seqDB search
MTESKQAGRYQAAFAALKEKNQGAFVPFVTLGDPSPQLSLKIIDCLVENGADALELGFPF
SDPLADGPVIQAANLRSLAAGTTPTQCFEMLTEIRAKYPQLPIGLLLYANLVYANGIDTF
YAKAQAAGVDSVLIADVPVEEADPFIASAKAHGVAPIFIAPPNADRDTLKMVSEKGEGYT
YLLSRAGVTGTESKAGMPIGEILSRLKEFNGAPPLLGFGIAKPAQVKAAIEAGAAGIISG
SAVVKIIAANKDDETALLAKLGEFTRNMKAAT
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaatctaaacaagcaggccgttaccaggcagcatttgccgcactaaaagaaaaa
aatcagggcgcgtttgtgccattcgtgactttaggcgatccaagcccacaactgtcactt
aagatcatcgactgtttagtcgaaaatggcgccgatgccctagagctaggttttcccttc
tctgatccactggccgatggccctgtcattcaagcagccaacctaagatcactggccgcg
ggcactacgccgactcagtgtttcgagatgctcaccgaaattcgagctaaatatccgcag
ctgcccatcggcctcttgctgtatgcaaaccttgtgtacgccaacggtatcgatactttt
tacgccaaggcccaggccgccggtgtggattcggtgcttattgccgatgtaccggtagag
gaagccgacccctttatcgcatcagccaaggctcatggtgttgcgcctatctttatcgca
ccgccaaatgccgatcgtgacaccctaaaaatggtgagcgagaaaggcgaaggctacact
tatttgctttcacgcgccggtgtcacaggcacagaatctaaggcgggtatgccaatcggt
gaaattttatctcgcctcaaagagtttaacggcgcgccgccattactcgggttcggtatt
gcaaagcctgcacaagttaaagccgccatagaagcaggcgctgccggtatcatctctggc
tcggcagtggtgaagatcattgccgctaataaagatgatgaaactgcattgctagctaag
ctgggcgagtttacccgcaacatgaaggccgctacctaa

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