KEGG   Shewanella violacea: SVI_2905Help
Entry
SVI_2905          CDS       T01206                                 

Gene name
fadB-2
Definition
fatty oxidation complex subunit alpha
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
svo  Shewanella violacea
Pathway
Fatty acid metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Module
beta-Oxidation
Class
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:svo00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:svo00650]
Metabolism; Lipid metabolism; Fatty acid metabolism [PATH:svo00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:svo01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:svo00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:svo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:svo00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:svo00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:svo00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:svo00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:svo00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3290328..3292454)
Genome map
AA seq 708 aa AA seqDB search
MEKTFNLVRREDGIAVLTIDVPGETMNTLRTEFAAEITEVLAEIKADTSIKGLVLASGKK
DCFVAGADISMLDACTSVEDAKALSQQGHIVFNELEALSIPVVAAIDGVCLGGGLELALA
CHLRVCSQNGKTMMGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVDDVVPESILLATAVKMALKGKVAPKKENKSLVNKLLEGTAVGRNIIFDQAGKQVQKK
TQGNYPAPAKIIDCVRQGMAKGKTKGLEVEASHFAELVMSKESAALRSIFFATTEMKKET
GAGDVKPRKVNKAMILGGGLMGGGIASVTTSKAKIPARVKDISEQGLSNALSYAYKLLDK
GVKRRHMTPSARDNIMSLMTTTTEYIGIKYADIVVEAVFEDLSLKHQMVKDVERECGENT
IFASNTSSLPISQIAEAAARPENVIGLHYFSPVEKMPLVEVIAHKKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILEAELGERFKAPAAFDKLLSDGRKGRKNGKGFYLYAGKAKKKAKQVDE
SVYQVLGLKPGVNAEVSEVAQRCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFL
GGPFHYIDTLGAGVLVAKLEKYQAKHGDRFTPCNKLIEMAESNQRFFD
NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt
atggaaaagacatttaatttagttcgtcgtgaagatggcatcgctgtactgacgatagat
gtacccggtgaaaccatgaatactctgcgcaccgagtttgctgccgagatcactgaggtt
ttggctgaaattaaagccgataccagtatcaagggactagttttagcttcaggtaagaaa
gattgtttcgttgccggtgcagatatttccatgttagatgcatgtacctcggtagaagat
gccaaggcactgtcacagcaagggcatattgtatttaacgaactcgaagccttatctatc
ccagttgtggcggcgatagatggcgtgtgtctgggcggcggtctggagctggcattggct
tgtcatctaagagtatgtagccaaaacggtaagaccatgatgggcgtgcctgaggttcag
ctaggcctgctacctggcggcggtggaacccaaaggttacctagactcgtgggtatcact
acggcgttagatatgatgctcacgggcaagcagatccgtcctaagcaagcgttgaagatg
ggcttggtcgacgatgttgtccccgagtcgatactgttagctaccgcagttaaaatggcg
ctgaaaggtaaagtagcgcctaagaaggagaataagtctctggttaacaagttactagaa
ggcacagctgttggccgcaatatcatcttcgatcaggcgggtaagcaagttcagaagaag
actcaaggtaattaccctgcacctgccaagattattgactgtgtgcgtcaaggcatggcg
aaggggaaaaccaagggactggaagtggaagccagccatttcgccgagctggttatgtcg
aaagagtcggccgcattaagaagcatcttctttgccacgaccgagatgaagaaagagacc
ggcgccggtgatgttaagcctcgcaaggttaacaaggctatgatactcggtggcggcctt
atgggcggcggtattgcctctgtgacgaccagtaaggctaagatcccggcgcgagtgaaa
gatatcagtgagcaggggcttagcaacgcactttcttatgcttataaactgctggataaa
ggtgtaaagcgtcgtcatatgacgccatcggccagagacaatatcatgtcgctgatgacc
acaaccactgagtatatcggcattaaatatgccgatatcgtggtagaggccgtttttgaa
gacttgagccttaagcatcagatggtaaaagatgtcgaacgcgagtgtggcgagaacacc
atttttgcatcaaatacctcttcactgcctatctcgcagattgctgaggctgctgctcgt
cctgaaaatgttatcggtctgcattacttttctccggttgagaagatgcccttggttgaa
gttatcgctcataagaaaacgtcgccagagaccatagcgactacggtagcctttgctcgc
aagcaaggtaaaacgcctattgttgtacaagatggtgctggcttttatgtgaatcgaatt
ttagcgctttacatgaatgaagctgcacaattgctgcttgaaggtcagagtgttgagcat
cttgacaaggcactggttaagtttggcttcccagttggtcctatgacactactcgatgaa
gttggaatcgatgtcggcgctaagatatcccctatattggaagctgagttaggcgagcga
tttaaggcgcctgctgcgtttgataagttgctgagcgatggcagaaagggtcgtaagaac
ggtaaaggcttctatctgtacgctggcaaggccaagaagaaagctaagcaagtcgacgag
agtgtctaccaagttctcggcttgaaacctggcgtgaacgcagaagtgtctgaagtcgcc
cagcgttgtgtggtgcagatgctcaatgaagctgtgcgttgtttggaagaggggattatc
gcctcaccacgtgatggtgatataggtgctatcttcggcattggtttcccgccattccta
ggtggaccattccattatattgatacgttaggagccggggttttagttgcaaaactagaa
aaataccaagccaagcacggtgacagatttacaccttgtaataagttgatagagatggct
gagagcaatcagcgtttcttcgactaa

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