KEGG   Shewanella violacea: SVI_3858
Entry
SVI_3858          CDS       T01206                                 
Name
(GenBank) Cation/multidrug efflux protein
  KO
K18138  multidrug efflux pump
Organism
svo  Shewanella violacea
Pathway
svo01501  beta-Lactam resistance
svo01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:svo00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SVI_3858
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SVI_3858
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:svo02000]
    SVI_3858
   01504 Antimicrobial resistance genes [BR:svo01504]
    SVI_3858
Transporters [BR:svo02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   SVI_3858
Antimicrobial resistance genes [BR:svo01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    SVI_3858
SSDB
Motif
Pfam: ACR_tran SecD_SecF DUF1627
Other DBs
NCBI-ProteinID: BAJ03829
UniProt: D4ZCT4
Position
4415301..4418390
AA seq 1029 aa
MRFTDIFIRRPVLAASISLLLLLLGLYSLNSMQVREYPEMTNTVVTVSTSYYGADANLIQ
GFITQPLEQALAQADNVDFMTSDSTLGTSKITVYMKLNTDPNGALADILAKVNSVRSQLP
KEAEDSTVNMSTGSQTSVLYISFYSNQLNSSQITDYLDRVVKPELFTIDGIAKVNLYGGI
KYALRIWLDPARMGAFNLSSSEVMQVLQANNYQSAVGQTNGVFTLFNGTADTQVGTVDEL
KKLVIGSKKGLVIRLGDIADVSLEKSHDIYRALADGQEAVVVALDVTPTANPLVVAADAR
ALMPDIERNLPVSMKVRILFDSSLAIDESINEVIKTIGEASLIVILVITLFLGSLRAVII
PIVTIPLSLIGVAIIMQMFGFTLNLMTLLAMVLAIGLVVDDAIVVVENVDRHIKLGETPF
RAAIIGTREIALPVISMTITLAAVYAPIALMGGITGSLFKEFALTLAGSVFISGIVALTL
SPMMCSKILKPQTNPNRFERGVESFLGGMTKRYQRMLDAVMEKRPVIIGFAAIVFASLPV
MFHFIPSELAPNEDKSVVMMMGTAPSTANLDYIQANMALVTDIIKSHPETAASLAFVGVP
NSNQAFGLAPLVPWSERDKSQKEMQKILGDEVKQVPGMAVTTFQMPELPGASSGLPIQFV
ITTSNSFESLFQIGSGVLEKVKNSPLFVYSKIDLKFDSGTMKLHIKRDLAGTYGITMQDI
GVTLTTMMSDGYVNRVNLDGRSYEVIPQVKRKDRANPESLNNYYVKAADGRSIPLSSLVE
IEMISEPRSLPHFNQMNSLTVSGVATPGVAMGDVVSFLQNIGDTDLPKGYNYDFLGESRQ
YVTEGSALFATFGLALAIIFLVLASQFESLRDPLVILVSVPLAISGALIALGWTHVFGLS
SMNIYTQVGLITLVGLITKHGILMCEVAKEEQLHNGLSKMDAIKLAATVRLRPILMTTAA
MIAGLIPLLFAVGAGAVARFNIGLVIVSGLSIGTLFTLFVLPVIYTYLAEKHEPLPVFDE
EPRLDTLKV
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgcgctttactgatatttttattcgcaggccggtactcgccgcctcgataagtttactc
ctgctgctattaggactttactcccttaacagcatgcaggttcgtgaatacccagagatg
accaatactgtggtcaccgtctccaccagctactatggagccgatgcaaacctgatccaa
ggctttatcactcagccacttgagcaggctctggctcaggccgacaacgtcgactttatg
acctcagacagtacccttggtacctccaagatcactgtctatatgaagctcaacacagat
cccaatggtgccctggctgatattctggctaaggttaactcggtgcgttctcagctgcca
aaagaggccgaagactccaccgtaaatatgtccacaggttcacaaacttctgtcctgtat
atctccttctatagcaatcagctcaactcgagccagataactgattatctggaccgagtg
gtaaaacctgaactatttaccatagatgggattgctaaagttaacctatatggtggtatc
aagtacgccctgagaatatggttagaccccgcgcgcatgggggcatttaacctctcctca
tctgaggtgatgcaggttctgcaggccaacaactatcaatcagccgtgggccagaccaat
ggcgtatttaccctgttcaatggtacagccgatactcaggttggcaccgtcgatgagctg
aaaaaactggtcataggcagcaaaaaaggtctggttattcgtctcggtgatattgccgat
gtgagcctagagaagagtcacgacatctaccgcgctttagccgatggacaagaagcagtc
gtcgtcgcacttgacgttactccaacagctaaccctttagtcgtcgcggccgatgcgcgc
gctctgatgcctgatatcgagcgtaacctgccagtttcgatgaaggtccgcattctgttt
gactcctctcttgccatcgatgagtcaatcaacgaagtgatcaagacaattggtgaagcc
tcgctgatcgttatcttggtgatcaccctattcttaggctcactacgggctgtcatcatt
cctatcgtcaccataccgctgtcgttaattggtgtggccattatcatgcaaatgttcggc
ttcaccctgaacctgatgacactactggccatggtgctggccatcggcttagtggttgat
gatgctattgtggtggtagagaatgtcgacaggcatatcaagctaggtgaaaccccattc
agggccgccatcattggtacccgagagattgcactcccggtgatatccatgactatcacc
ttggcagcagtatatgcgcctatcgcactgatgggaggcataaccggctccttgtttaaa
gagtttgccctgaccttagccggctcggtattcatctcggggatcgtggcactgacattg
tcacctatgatgtgctccaagatcctcaagcctcaaaccaaccccaatcgtttcgagcga
ggtgtcgagagcttccttggaggcatgactaagcgttatcagcgtatgcttgatgccgtg
atggaaaagcgccccgtgattatcggcttcgcggctatcgttttcgcctcactgccggtg
atgtttcactttatcccctctgaacttgcacctaatgaagataagagtgtagtcatgatg
atggggacagccccctcgacggctaacctggattacatacaggccaacatggccctagtg
acagacatcattaagagccacccggaaaccgccgcatctctcgccttcgtcggtgtgcca
aactcaaaccaggccttcggtctcgctccactcgtcccttggagtgaacgagataagtct
caaaaagagatgcagaagatactcggtgacgaagttaaacaagttcctggaatggcggtc
accacctttcagatgcctgagcttcctggcgcatccagcggtttacctatccagttcgtt
atcaccacctcaaactcattcgagagcctgttccaaattggcagcggtgtacttgagaag
gtgaagaatagtccactatttgtttactccaagatcgacctgaaattcgactcgggtacc
atgaagctgcatatcaagcgggacttagccggcacttacggcatcacaatgcaagatatc
ggcgtgaccctgaccaccatgatgagtgacggttatgtcaaccgcgtcaacttagatggt
cgctcatacgaagtcatccctcaggttaagcgtaaggaccgcgccaatccggaatcactc
aataattactatgtgaaggctgccgatggccgttcgatcccactatcaagcttagtggaa
attgagatgatatctgagccgagatctttaccacactttaatcagatgaattcactaacg
gtgagcggtgtagcaacacctggagtggcgatgggagatgttgtctccttcttgcaaaat
attggtgataccgatctgccaaaaggctacaactatgacttcctaggtgaatctcgccaa
tatgtcaccgaaggctcagccctgtttgccaccttcggcctagcactggcgatcatattc
ctagtactagcgagtcaattcgagagtctccgggatcctttggttatcttggtgtctgta
cctctggccataagcggcgcactcattgccctaggctggacgcatgtcttcggtctatcg
tcgatgaacatctatacccaagttggtctgatcaccttagtgggcttgatcactaaacac
ggtatcttaatgtgtgaagttgccaaggaggaacaactccataacggtctgagcaagatg
gatgcgattaagcttgcggctaccgtacgcttacgcccgattctaatgactacggcggcc
atgattgccggccttattcctctgctatttgcggtgggtgctggtgcagtggcacgcttc
aacataggtttggtgatagtgtctgggttaagcataggcacactgttcaccctcttcgtg
ttaccggtgatctatacttatttagctgagaagcacgaacctttacccgtttttgacgaa
gaaccaaggctagatacactaaaagtctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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