KEGG   Streptomyces violaceoruber: B1H20_24295
Entry
B1H20_24295       CDS       T05124                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
svu  Streptomyces violaceoruber
Pathway
svu03420  Nucleotide excision repair
svu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:svu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B1H20_24295
   03430 Mismatch repair
    B1H20_24295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svu03400]
    B1H20_24295
Enzymes [BR:svu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B1H20_24295
DNA repair and recombination proteins [BR:svu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1H20_24295
   MMR (mismatch excision repair)
    Other MMR factors
     B1H20_24295
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: ARF64150
UniProt: A0A1V0UGE7
Position
5521164..5524847
AA seq 1227 aa
MSPRITDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIAAGVTDPDAIDPDNPPGEPAISTYHAFAGRLL
TEHGLRIGLEPSTRLLADATRYQLAAKVLREAPGPYPALTRSFSTLVSDLLALDAELSEH
LVRPGTLEAYDTELLRDLADARLSNADLRKIPETAEARRSLLGLTERYRAAKRARDLLDF
GDQIALSAELALTRPEVGRILRDEFRVVLLDEYQDTSVAQRLLLSALFGGGSGTGGAGGA
GTGAGGGSGGAGTDAGRGGGSGSGWAGGSGSGSGVGGGGDGTESGAARPAPTGHAVTAVG
DPCQAIYGWRGASVANLDDFPEHFPHADGAPATRYSLSENRRSGGRLLQLANGLAEPLRA
MHEGVEALRPAPGAERDGVVRCALLPTHTEEIDWLADSLAHLVRTGTPPGEIAVLCRTAG
DFPEIQAALVARDIPVEVVGLAGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GPRDLALLGRRARLLVHRAGQADGADADQRLADAVEGTDPAEVISLADALDTFLVAGDTA
DDGLPFSAEARVRFARLARELRDLRRSLADPLMDVLHRVLATTGLEVELSASPQALAARR
RETLGNFLDLAARFASLDGEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKSK
GLEWDVVAVPGLVTGQFPSGQSRDAWTAQAKVLPHALRGDAATLPALDTHDGLDAKGIKA
FKAEMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRTRGPSAFLEALYEHCAAGY
GEIEAWADEPAEGEENPALAERDADLAWPLPLDADALARRRAARDTVLAHLERLAGREDE
REPAYAPGPDDVPAHEPWDDEPPLDEPPADEDWDWDALPTERPPGPPESGAGPADTPPRT
ESAPDPADAPPHPESAPRIPAARHAQEAADPVDRLTPEEARTLASWDRDMESLAGELRRA
RATVREVVVPASLSATQLLRLAEDPDGFARELARPMPRPPQPAARRGTRFHAWVESRYEE
LPLPLLGPDELPGGDGSDAEIADERDLAELKEAFERTAYARRTPYRVETPFQITLAGRVI
RGRIDAVYRTGDAYEIVDWKTSRHRTADPLQLAVYRLAWAELHGLPLDEVTATFLYVRTG
ETVRPRSLPGRAELERILLDEPAPEDG
NT seq 3684 nt   +upstreamnt  +downstreamnt
gtgtccccgcgcatcaccgatcccgagcagctcaaggagcttctcgggatcccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggggcc
gggtcgggcaagaccacggtgatggccgcccgcgtggtctggctggtcggcaccggacag
gtcgcccccgagcaggtcctcggcctcacgttcaccaacaaggccgccggcgagctggcc
gaacgcgtccgcaaggcgctgatcgccgccggggtcaccgaccccgacgccatcgacccg
gacaaccccccgggcgagcccgccatctccacgtaccacgcgttcgccggccgcctcctc
accgagcacgggctgcgcatcggcctggaaccgtccacccgcctgctggccgacgccacc
cgctaccagctcgcggccaaggtgctgcgcgaggccccgggcccgtacccggcgctcacc
cgctccttctccaccctggtcagcgacctcctggcgctcgacgcggagctgtccgaacac
ctcgtgaggccggggacgctggaggcgtacgacaccgagctgctgcgggacctggccgac
gccaggctcagcaacgccgacctgcgcaagatccccgagaccgccgaggcccgccgctcg
ctcctcggcctcaccgagcgctaccgggccgccaagcgcgcccgcgacctgctggacttc
ggcgaccagatcgccctctccgccgagctggcgctgacccggcccgaggtcgggcggatc
ctgcgggacgagttccgcgtcgtcctcctcgacgagtaccaggacacatcggtcgcccag
cgcctgctgctctcggccctgttcggcggaggcagcggcaccggcggggccggcggcgcg
ggcaccggggcaggcggaggcagcggcggcgcaggcactgatgcaggccgaggcggaggt
agtggcagcggctgggctggcggcagcggcagcggcagcggcgtcgggggaggcggtgac
ggtacggagtcgggtgcggcccggcccgcgcccaccggccacgcggtgaccgccgtcggc
gacccctgccaggcgatctacggctggcgcggcgcgtccgtcgccaacctcgacgacttc
cccgagcacttcccgcacgccgacggcgcccccgccacccgctacagcctcagcgagaac
cggcgcagcggcggccggctcctccagctcgccaacggcctcgccgaaccgctgcgcgcg
atgcacgaaggcgtcgaggccctgcggcccgcgcccggcgccgagcgcgacggcgtggtc
cgctgcgccctgctgcccacccacacggaggagatcgactggctcgcggactccctcgcc
cacctggtccgcaccggcaccccgcccggcgagatcgccgtcctgtgccgtaccgccggg
gacttccccgagatccaggcggccctggtcgcccgggacatcccggtcgaggtcgtcggc
ctcgccgggctgctccacctgccggaagtggccgacctggtcgccgtctgcgaggtcctc
caggacccgggggccaacgcgtccctggtccgcctcctcaccgggccccgctggcgcatc
ggcccccgcgacctcgcgctcctcggccgccgcgcccggctcctggtgcaccgggccggc
caggcggacggcgccgacgccgaccagcggctcgcggacgccgtcgaggggacggacccg
gccgaggtgatatcgctcgcggacgcgctggacaccttcctggtggcgggggacacggcc
gacgacgggctgccgttctccgccgaggcccgcgtccgcttcgcccgcctcgcccgggaa
ctgcgcgacctgcgccgctccctcgcggaccccctgatggacgtgctccaccgggtcctg
gccaccacaggcctggaggtcgagctgtccgcgtccccgcaggcgctggccgcccgccgc
cgcgagaccctcggcaacttcctggacctggcggcccgcttcgcctccctggacggcgag
gcgtcgctgctcgccttcctcggcttcctgcggaccgccgcccagtacgagaagggcctc
gacaacgcgctgcccggcggcgagaacaccgtcaaggtcctcaccgcccacaagtccaag
gggctggagtgggacgtggtcgcggtccccgggctggtcaccggccagttccccagcggc
cagtcccgggacgcctggaccgcccaggccaaggtgctcccgcacgccctgcgcggcgac
gcggcgacgctccccgccctggacacgcacgacggcctcgacgccaaggggatcaaggcg
ttcaaggcggagatgaaggagcaccagcacacggaggagctgcgcctcggctacgtcacc
ttcacccgcccccgctcgctgctcctcggctccggccactggtggggcccgtcccagaag
cgcacgcgcggcccgtccgccttcctggaggcgctgtacgagcactgcgccgccgggtac
ggggagatcgaggcgtgggcggacgagcccgccgagggcgaggagaacccggccctcgcc
gagcgcgacgcggacctcgcctggccgctcccgctcgacgccgacgccctcgcccgtcgc
cgggccgcccgcgacacggtcctggcccacctggagcgcctcgccgggcgggaggacgag
cgggagccggcgtacgcccccggacccgacgacgtaccggcgcacgagccctgggacgac
gagcccccgctcgacgagccgccggccgacgaggactgggactgggacgcgctccccacc
gaacgcccgcccggcccgcccgagtccggcgcgggcccggcggacacgcccccgcgcacc
gagtccgccccggacccggcggacgcgcctccgcaccccgagtccgcaccgcgcatcccg
gcggcccgccacgcccaggaagccgccgaccccgtcgaccggctcactcccgaggaggcc
cgcaccctcgcctcctgggaccgggacatggagtccctcgcaggcgagctgcgccgcgcc
cgcgccaccgtgcgcgaggtcgtcgtccccgcctcgctctccgccacccagctgctgcgc
ctggccgaggaccccgacggcttcgcccgggagctggcccggcccatgccccgcccgccg
cagcccgccgcccgccggggcacccggttccacgcctgggtggagtcccggtacgaggag
ctgccgctgcccctgctcggccccgacgaactgcccgggggcgacgggagcgacgcggag
atcgccgacgagcgcgacctcgccgagctgaaggaggcgttcgagcgcaccgcgtacgcc
cggcgcacgccgtaccgcgtggagacccccttccagatcaccctggcgggccgggtgatc
cggggccgtatcgacgcggtctaccgcacgggtgacgcctacgagatcgtcgactggaag
accagccgccaccgcacggccgacccgctccagctcgccgtctaccggctcgcctgggcc
gaactgcacggtctgccgctggacgaggtcaccgccaccttcctctacgtacgcaccggg
gagaccgtccgcccccggtccctgcccggccgggcggagctggagcgcatcctgctggac
gagccggcccccgaggacggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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