KEGG T02449: A284

Staphylococcus warneri: A284_00025

Entry

A284_00025        CDS       T02449

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

swa Staphylococcus warneri

Brite

KEGG Orthology (KO) [BR:swa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:swa03032]
    A284_00025 (gyrB)
   03400 DNA repair and recombination proteins [BR:swa03400]
    A284_00025 (gyrB)
Enzymes [BR:swa01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     A284_00025 (gyrB)
DNA replication proteins [BR:swa03032]
Prokaryotic type
  DNA Topoisomerases
   A284_00025 (gyrB)
DNA repair and recombination proteins [BR:swa03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A284_00025 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3

Other DBs

NCBI-ProteinID:

AGC89336

Position

4529..6463

AA seq 644 aa
MVNTLSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEAL
AGYADEINVTIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVS
GGLHGVGSSVVNALSEDLEVYVHRNDTIYHQAYKKGVPQFDLKEIGSTDKTGTAIRFKAD
SSIFTETTVYNYETLQQRIRELAFLNKGIQITLTDERDEDDIRQDSYYYEGGIKSYVEML
NENKEPIHGEPIYIHQSKDDIEVEIAIQYNKGYSTNLLTYANNIHTYEGGTHEDGFKRAL
TRVLNSYGMNSKIIKEDKDRLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVV
DKLFSEHFERFLYENPSVGRIIVEKGIMASRARVAAKKAREVTRRKSALEISSLPGKLAD
CSSKNPEESEIFLVEGDSAGGSTKSGRDSSTQAILPLRGKILNVEKARLDRILNNNEIRS
MITAFGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIA
QPPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSIARYKGLGEMNADQLWETTMNPEH
RSMLQVTLEDAIDADQTFEMLMGDIVENRRQFIEDNAVYANLDF

NT seq 1935 nt +upstreamnt +downstreamnt
atggtgaatacattgtcagatgtaaacaacacagataattatggtgctgggcagatacaa
gtattagaaggactagaagcggtccgtaaacgacctggtatgtatatcggttcaacttca
gaaagaggcttgcaccatttagtatgggaaattgttgataatagtattgacgaagcatta
gcaggctatgctgatgaaattaacgtaacaattgaaaaagataattggattaaagttact
gacaatggtcgtggtatcccagtagatattcaagaaaaaatgggacgtccagcagttgag
gttattttaactgtacttcatgccggaggtaaattcggtggtggcggatacaaagtatca
ggtggtctacatggtgtaggttcatccgttgttaatgccctatcagaggatttagaagta
tacgtacatcgtaacgatacgatttatcaccaagcctataaaaaaggtgtacctcaattt
gatttaaaagaaattggtagcacagataaaacaggtacagcaattcgttttaaagcggat
agtagtatctttactgaaacaactgtttacaactatgaaacattacaacaacgtattcgt
gagttagcattcttgaacaaaggtattcaaatcactttaacggatgagcgagacgaagat
gatatcagacaagattcttattactatgagggtgggattaagtcttatgtagaaatgttg
aatgaaaataaggaacctatccatggcgaacctatttacattcaccaatctaaagatgat
atcgaagttgaaattgcgatccaatataataaaggctattcaacgaatttattaacatat
gccaacaatatccacacgtatgaaggtggtacgcatgaagatggctttaaacgtgcgtta
acacgtgtattaaatagttatggtatgaatagtaaaattatcaaagaagataaagataga
ctttcaggtgaagacacacgtgagggtctaacagctattatttctattaaacatggtgat
cctcaattcgaaggtcaaacgaaaacaaaattaggaaactctgaagtgcgacaagttgta
gataaattattctctgagcactttgaacgtttcttatatgaaaatcctagtgttggtaga
attattgttgaaaaaggtattatggcatctcgtgcacgtgttgctgcaaagaaagcacgt
gaagtgacacgtcgtaaatcagcattagagatttcaagtttacctggtaaacttgctgac
tgctctagtaaaaaccctgaagaaagtgaaattttcttagtcgaaggggattctgccggt
gggtctactaaatcaggccgtgactcaagcacacaggcgattttaccattgagaggtaag
attcttaatgttgaaaaagcacgtctagatcgtattttaaataacaatgaaattcgttct
atgattacagcatttggtacgggtatcggtggagaatttgatattagtaaagcacgttat
cataaaattgtaattatgacagatgctgatgttgatggtgcccatatcagaacattgtta
ttaacattcttctatcgttttatgagaccgttaattgaagcgggatacgtttatattgca
caaccaccgttatacaaattaacgcaaggtaagcaaaaatattacgtcttcaacgataga
gaactagataaattaaaagcagaattaaatccaacacctaaatggtctattgcccgttat
aaaggtcttggtgaaatgaatgccgaccaattatgggaaactacgatgaatccagaacat
cgttcaatgttacaagtaacattagaagatgcaattgatgccgaccaaacatttgaaatg
ttaatgggtgacattgttgaaaaccgtagacaatttattgaagataacgcagtctatgcc
aacctagatttctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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