KEGG   Shewanella woodyi: Swoo_0021Help
Entry
Swoo_0021         CDS       T00676                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
swd  Shewanella woodyi
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:swd00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Swoo_0021 (fadB)
   01212 Fatty acid metabolism
    Swoo_0021 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Swoo_0021 (fadB)
   00650 Butanoate metabolism
    Swoo_0021 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Swoo_0021 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Swoo_0021 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Swoo_0021 (fadB)
   00310 Lysine degradation
    Swoo_0021 (fadB)
   00380 Tryptophan metabolism
    Swoo_0021 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Swoo_0021 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Swoo_0021 (fadB)
   00281 Geraniol degradation
    Swoo_0021 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Swoo_0021 (fadB)
Enzymes [BR:swd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Swoo_0021 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Swoo_0021 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Swoo_0021 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Swoo_0021 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(26419..28569)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIARLCFNAAGSVNKLDRETIDSLNAALDAIKQDTNIQGLVLTSG
KGAFIVGADITEFLGLFAQEESVLLPWIAEANVVFNKIEDLPFPTISAINGFALGGGFET
VLATDFRIADTTAKLGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDHKPEAALK
VGAIDAVVAPENLEASAIAMLKEALSEKLDWQARRAKKQAPLNLPKLEAMMSFATAKGMV
FKVAGKHYPAPMTAISVIEQAARSERADALMVEHQAFIKLAKTDVAQALIGIFLNDQLVK
GKAKKAGKLAKNVDSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEASKLL
AAQIKRGRSTPEKMAKVLNNITATLDYAPVKDVDVVVEAVVEHPKVKSMVLAEVEQNVSD
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGIDTGHHAQAVMAEGFPDRMGKDGKDAIDIMFDSERFGQKNNKGFYAYSVDRRGKP
KKDLDPTSYELLGAEFGDLKAFESDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVF
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacgattcaggttgagttacttgaagacaatattgctcggtta
tgctttaacgctgccggctctgtcaataaactagacagagagacaatagactcactcaat
gctgcattagacgcaattaagcaagacacgaatattcaaggtctcgttctgacttcagga
aaaggcgcctttattgtcggtgctgacatcactgaatttctcggtctatttgctcaagag
gagagtgttcttcttccttggattgctgaagcaaacgttgttttcaataaaattgaagac
ctgccattccccacgatctcagccattaatggctttgcactgggtggcggttttgaaacc
gtactcgcaacggatttccgtattgctgataccacagccaaacttggcctaccagaaact
aagcttggattaattccaggttttggcggcacagttcgtcttccccgccttattggtgcc
gataacgcacttgagtggatcacaactggtaaagatcataagccagaagccgctcttaaa
gttggtgctatcgacgcagttgtcgcaccagagaatttagaggcatcggctatcgccatg
ctgaaagaagccttaagtgaaaagttagattggcaggcacgccgcgctaaaaagcaagct
ccgctaaacctacctaagcttgaagctatgatgtcattcgccaccgccaagggcatggta
tttaaggttgcaggcaaacactaccctgcgccaatgacagccattagcgttatcgagcaa
gctgctcgcagtgaacgcgctgacgcattaatggtcgagcatcaagcctttatcaagctc
gctaaaaccgacgtagcacaagcgctaatcggtatcttccttaatgaccaactggtcaaa
ggcaaagctaagaaagcgggtaagttagctaaaaatgtcgacagtgctgctgtacttggt
gccggcatcatgggtggtggtatcgcataccagagtgccagcaaaggcacaccaattgtg
atgaaagatatcgcacagccagcgcttgatcttggtctaggtgaagcgtctaagctatta
gccgctcaaattaagcgtggccgctctacaccagagaagatggctaaggtactgaacaac
atcaccgcgacactggactacgcgccggttaaagatgtcgatgttgtagtcgaagccgtt
gttgagcatccaaaagtaaaatccatggtgcttgctgaagttgagcaaaatgtcagtgac
gatgccatcatcacatcaaacacctcaaccatctcaatcaacctactcgctaagagcctt
aagaagcctgagcgcttctgtggaatgcacttctttaacccagtgcataagatgccactt
gttgaagttatccgcggcgaaaacagctctgaagagactatcgcttcggtcgtggcttat
gccagtaaaatgggtaagacaccaatcgttgttaatgattgcccaggtttcttcgtaaac
cgcgtactcttcccttactttgcaggctttagcggtctactcgccgatggcgcagatttc
gcggcaatcgataaggtgatggagaagcagtttggttggcctatgggtcctgcatacctg
cttgatgttgtcggtatcgatacaggccatcatgctcaagcggtaatggcagaaggtttc
cctgatcgcatgggtaaagatggcaaagatgctatcgatatcatgtttgactcagagcgt
ttcggtcagaagaacaacaaaggtttctacgcttactcagtagaccgccgcggcaaacca
aagaaagatctcgatcctacaagctatgagctacttggcgcagagtttggtgatcttaaa
gcatttgagtccgatgagattatcgctcgtactatgatccctatgattatcgaaacagtt
cgttgtctcgaagagggaattatcgcaacgcctgcagaagctgatatggggctagtattt
ggtcttggcttcccaccatttagaggtggtgtattccgctatatcgataccatgggtgtc
gctaatttcgttgcacttgctgataagtacgcccacttaggtggactttaccaagtgaca
gatgcgatgcgcgaactcgccgctaataatggcagctactatcaagcttaa

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