KEGG   Shewanella woodyi: Swoo_0306Help
Entry
Swoo_0306         CDS       T00676                                 

Definition
ATPase AAA
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
swd  Shewanella woodyi
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:swd00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    Swoo_0306
Enzymes [BR:swd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Swoo_0306
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(377050..379182)
Genome map
AA seq 710 aa AA seqDB search
MSKSRYLIRVTSVSGLNTHKDLVTIRGVPIESFRTQSAKKVVFAKVAKNDLPILPEVGQH
WKLTGTASEHYEIVNGFKYLAVKLDVSNAKVTLPDTGELFIDFVSSCADFKGIGAVKARE
LWNKFGKGIYDLMKEQNPKSFESLLSPESIKALLDGWRKYDNLKYQSWLSGLGIRPEISG
KIVKYHKEGTINSIKENPYRMMTFGMSFKDSDALAQTKFNMSLNDDRRLVAAVEQVLNQW
IGKGHTFAYRDDIFSDVITLLQDKQAAILALKKGLDNGTFIIADEGTYHPTGMLVIERII
AKRFKKLAKLEAWSFQHDDAYEQACSSSEFPLTERQGEAVYNALNYSISAVFGGAGTGKT
TVIRSVVAGFEALGFEIHQIALSGRAAKRMRESTGRPTKTIAAFLRDEPVVTEKAAVIID
ESSMVDANTMYQIITHTHDSVKFVLIGDPDQLPPIGAGLVLHAIQDSKLVPKVTLDIVKR
QDAESGIPGYSCDVKNGIVPERLSTGAVTFHEVPETEINETIVGLYAEATNATQIIAATY
KRENGGINALNHLEQTTLNNSSPELQFSLFNEDFILNLKVGDPILLTKNDIKLDIQNGTL
GELTSVATTENGFGEITLDDNRIINLDEALLDHIQLAYAISLHKAQGSQFERIVIPIVPS
KLLDRGWIYTAITRAEKEVHLIGNAKLFKRYIKEPSKAHLRQIYLSKLLN
NT seq 2133 nt NT seq  +upstreamnt  +downstreamnt
atgagtaagagtcgttatctaattcgagtaacgagtgtttctggactcaacactcacaaa
gacttagtaactatccgtggcgtaccgattgaatctttcagaacccaatcagctaagaag
gttgtatttgccaaggtagccaaaaatgacttgccaatactccctgaagtggggcaacac
tggaagcttactggcacagcttctgagcactatgaaattgttaatggctttaaatattta
gctgtaaaactagatgtatctaacgccaaagtaacgctaccagatacgggtgaactgttc
attgatttcgttagctcttgtgccgacttcaaagggattggagcggttaaagctagagaa
ctttggaacaagttcggcaaaggtatctatgaccttatgaaagagcagaaccccaaatct
tttgagtccctattaagccctgaatccatcaaagcacttcttgatggctggaggaaatac
gacaacttgaaataccaatcatggttatcaggcttaggaattagacctgagatctcagga
aaaatagttaagtaccacaaagaaggcactattaattcgataaaagaaaacccttatcgc
atgatgactttcggcatgtcgttcaaagattctgatgcattagcgcaaacaaaattcaat
atgagtttgaacgatgataggcgacttgttgctgctgtagagcaagtactaaatcaatgg
attggaaaaggtcatacatttgcctatcgagatgatatcttcagtgacgtaattaccctt
ttacaagataaacaagcagccatactagctcttaaaaaaggtttggataacggtactttc
atcatagctgatgaaggtacataccatcctacaggaatgctggtaatcgaaaggatcatt
gcaaaacgattcaaaaaactagctaaactagaagcgtggtcatttcaacatgatgatgca
tatgagcaagcttgtagctcatctgagtttcctctgactgagcggcaaggagaagccgta
tacaacgctttaaactactcaatatccgctgtttttgggggggctggtacgggtaaaact
acggtaatcagatctgtagtggctggttttgaagcccttgggttcgaaatccatcaaatt
gcactatctggtcgagctgctaaacgtatgcgagagtccacaggacgcccgacaaagact
atagccgcatttttaagagatgagccagttgttaccgaaaaagccgctgtaatcattgat
gagtcgtctatggtagacgcaaatactatgtaccaaatcatcacccacactcatgactca
gtgaagtttgtgcttatcggtgatccagaccaattgccgccaattggtgctggtttagta
cttcatgcaattcaagattccaagcttgtgcctaaagtaactttagatattgtgaagcgg
caagatgctgaatctggcattcctggttattcatgtgatgtaaaaaatggcattgttcca
gagcgcttgagcactggcgcagtgactttccatgaggtgcctgaaacagagatcaatgaa
actatcgttggcctctacgcagaagctacaaatgcgactcaaataattgcagcaacttac
aagagagaaaatggcggtatcaatgctcttaatcacttagaacaaacaacactaaacaat
agctcaccagaattacagttcagcctatttaatgaagacttcatactcaatttgaaagtc
ggtgatcccatccttttaaccaagaacgatattaagcttgatattcaaaatgggacattg
ggagagctaacttcagtagccacaacagaaaacggattcggagagatcacgcttgatgat
aaccgaataattaatcttgatgaggcactgcttgatcatattcagctagcctacgcaata
tcattacacaaagcacaagggagccagtttgagcgtattgttatccctatagtaccaagc
aagctacttgatcgaggatggatatacacagctattacaagagccgaaaaggaagttcat
ttaatcggaaatgcaaagttgtttaaacgttatatcaaggagccttcaaaagcccactta
agacaaatttatctatctaaattactaaactaa

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