KEGG T00676: Swoo

Shewanella woodyi ATCC 51908: Swoo_1002

Entry

Swoo_1002 CDS T00676

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

swd Shewanella woodyi ATCC 51908

Pathway

swd00020	Citrate cycle (TCA cycle)
swd00620	Pyruvate metabolism
swd00630	Glyoxylate and dicarboxylate metabolism
swd00680	Methane metabolism
swd01100	Metabolic pathways
swd01110	Biosynthesis of secondary metabolites
swd01120	Microbial metabolism in diverse environments

Module

swd_M00009	Citrate cycle (TCA cycle, Krebs cycle)
swd_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
swd_M00012	Glyoxylate cycle
swd_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:swd00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:swd00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:swd00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:swd00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C 3Beta_HSD Semialdhyde_dh NAD_binding_10

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1313545..1314480

AA seq 311 aa
MKVAVLGAAGGIGQALALLLKTQLPADSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAG
QDPSPALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNP
VNTTVAIAAEVLKAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVNVNVIGGHSGV
TILPLLSQIEGVSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLQGEANVVECAYVDGGSEHAEFFAQPILLGKNGVEKVLAYGDVSEFEANARDAMLDTLN
ADIKLGVEFVK

NT seq 936 nt +upstreamnt +downstreamnt
atgaaagttgctgtacttggtgccgcaggtggtattggacaagctcttgccctactactt
aaaacacaattgcctgccgattctaaactatcactatatgatattgctcctgtaacacct
ggtgttgccgttgaccttagtcatatcccgacagctgtagaagttaaaggttttgcaggc
caagatccttcgcctgcacttgaaggtgctgatgttgttcttatctcagcgggtgttgct
cgtaagcctggaatggatcgctcagatctatttaacatcaacgcaggtatcgttagaaac
ctagttgaaaaatgtgctgcaacttgccctaaagcacttatcggtattatcactaaccca
gtaaacacaacagttgctattgctgctgaagtgttgaaagcggcaggtgtatacgataaa
aatcgtttatttggtgtgacaactttagatgtgatccgctctgaaacttttgttgctgaa
gcaaaaggtcttaacgttgccgatgtgaatgtcaatgttattggtggtcacagtggtgtg
acgattcttccacttctttctcaaattgaaggcgtgagctttagtgatgaagaggttgct
gcattaacaactcgtatccaaaatgctggtactgaagttgttgaagctaaagctggcggc
ggcagtgcaacactttcaatgggtcaagcggcttgtcgttttggtctgtcacttgtacgt
ggtcttcaaggcgaagccaacgttgttgagtgtgcttatgtcgatggtggcagtgagcat
gcagagttcttcgcacaaccaatactacttggtaaaaatggcgtagagaaagtactagcc
tatggtgatgtgagtgagtttgaagcaaacgcacgcgatgccatgttagatacacttaat
gctgacatcaaactaggtgttgagttcgttaagtaa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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