KEGG   Shewanella woodyi: Swoo_1382
Entry
Swoo_1382         CDS       T00676                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
swd  Shewanella woodyi
Pathway
swd00740  Riboflavin metabolism
swd01100  Metabolic pathways
swd01110  Biosynthesis of secondary metabolites
swd01240  Biosynthesis of cofactors
swd02024  Quorum sensing
Module
swd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:swd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Swoo_1382
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swoo_1382
Enzymes [BR:swd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Swoo_1382
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Swoo_1382
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACA85674
UniProt: B1KJK1
Position
1738109..1739248
AA seq 379 aa
MNWSVEDIEMMSRAIKLARQGLYTTQPNPCVGCVVTKDGQILGEGFHIKAGGPHAEVHAL
AMANSDSNLGAKGATAYVTLEPCSHYGRTPPCAEALIHNKLARVVVAVEDPNPQVCGRGI
AMLRDAGIQVDVGLLQDEAYKINPGFMKRMETGLPWVTVKLASSLDGKTALANGASKWIT
GPEARRDVQRLRARHCALVTGVETILADNPSLNVRHSELGSLADRHSESDLHQPLRVVLD
SRARVTSDLALFAIESPILLVSCDDYPAIEQQSWPSHVKQVKLNCDESGRVDLNELFKYL
GKQCNSVLIEAGATLAGSVIAKGHGDELVLYQALKMLGSSGRNLITLPEYTAMSQIPAIK
LVDERKVGADTRLTLDIRS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaactggtctgtagaagatattgagatgatgagccgcgccatcaaactggcgcgccaa
ggtttatataccacgcagccaaacccgtgtgtgggttgtgtggtcaccaaagatggacag
atcctcggcgaaggtttccatatcaaagcgggtggcccccatgctgaagtgcatgctctg
gcaatggcaaatagtgattccaatttaggggccaaaggcgcaacagcctatgttaccctt
gagccatgcagccattatggtcgtacaccaccctgtgctgaagcccttattcacaataag
cttgctcgcgttgtcgttgcagttgaagatcccaatcctcaggtctgtggacgtggtatt
gccatgctcagggatgctggtattcaagttgatgttggtttacttcaagatgaagcctat
aagatcaatcccggctttatgaagcgtatggagactggtctaccttgggtgacggttaaa
ctggcttcgagcttagatggcaaaacggcattagccaatggcgcttcaaaatggatcaca
ggtccagaggctcgccgtgatgtacaaagacttcgtgcccgtcactgcgccttggtgaca
ggtgttgagaccatcttggctgataatccatcacttaatgttcgccatagcgagttgggt
tcattagccgataggcatagcgaaagcgatctacatcaaccacttcgcgtcgtattagat
agccgtgctcgggtgacatcagacttagccctatttgcgattgagtcgcccattcttctg
gtctcttgtgatgattatccagctatagagcagcaaagctggccgtcacatgttaagcag
gtaaagttgaactgtgatgagtctgggcgtgtggatctcaatgagctgtttaaatattta
ggaaagcagtgtaactcagtgcttattgaagcgggggcaactttggcagggagtgttatt
gccaagggccatggtgatgagttggtgctttatcaggcgctgaaaatgttaggttcaagt
ggacgtaatctaatcacacttcctgagtatacagccatgtcacagataccggctatcaag
cttgtcgatgaacgtaaagtcggggctgatacccgcttaactttagatataaggtcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system