KEGG   Shewanella woodyi: Swoo_2012Help
Entry
Swoo_2012         CDS       T00676                                 

Definition
tryptophan synthase subunit beta
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
swd  Shewanella woodyi
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:swd00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Swoo_2012
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Swoo_2012
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Swoo_2012
Enzymes [BR:swd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Swoo_2012
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2471726..2473048
Genome map
AA seq 440 aa AA seqDB search
MDQLKDKLRSNNVNKLDYQLSLEDMPTQWFNFFPHLPKPLPPVRDNGKRSTLEISQLIRP
KILLEQNAPKENWIDIPEEVINKLIMCGRPTPLRRALSLEKHLKTPARIYFKREDTMATG
SFKLSTAVAQAYYAKQEGREILISETGAGQWGMSVALVSQMFGLDARIFMARCSLEQKPY
RQHYMKMLGCEVYPSPSTKTECGKELLLQTPGHPGSIGSAISEAIENALDTPGSAYLSGS
NVNHVHLHQTLLGLEVKQQLSMAGESNVDHLVACVSGGSNLCGFMMPFLPEKNSGAKIDM
LGVESTASPRLTQGTYEYCRSDVAGYTPEVLSHSMGESYIPAPVHVGGLRNHNSSPLVSL
LCREGILRAEALDEFNAFKAGQIMLKTEGILVAPESSHAVAAAIDLAEKARIENKESVIV
FLASGNGFLDLQGYNDVLNN
NT seq 1323 nt NT seq  +upstreamnt  +downstreamnt
atggatcaattgaaggataagctcaggtcaaataatgtgaataaattagattaccaactc
tctttagaagatatgcccactcagtggtttaatttcttcccccacctacctaaaccatta
cctccagtaagggacaatgggaagcgttcaactctggagattagccagttaattcgccct
aaaatattacttgagcaaaacgcgccaaaagagaattggatagatattcccgaagaggtg
ataaataagttgatcatgtgtggtcgaccgacaccattgcgcagagcattgagtctagag
aaacaccttaagacgcctgcaagaatctactttaagcgggaagacaccatggcgacaggg
agttttaaactctccactgcagttgcacaagcatactatgcgaaacaagaaggtagagag
attcttatatcggaaaccggtgcaggacaatgggggatgagtgttgctttggtgagtcag
atgtttggccttgatgctcgaatatttatggctaggtgttcattagagcaaaaaccgtat
cggcaacattatatgaaaatgcttggatgtgaagtatatccttcaccgtcaactaaaaca
gagtgtggtaaagaacttctactccaaactccaggtcaccctggaagtattggtagcgcg
attagtgaggctattgagaatgctttagacacgccgggatctgcttatttatctggaagc
aatgtaaatcatgtgcacttacatcaaaccttgcttggtttagaggttaagcagcagcta
tcgatggctggtgaatctaatgtggatcatcttgtagcttgtgtcagtggcgggagtaat
ttatgcggctttatgatgccatttctgcctgagaagaacagtggagccaaaattgatatg
ttgggtgtggagtcaactgcctccccacgattaacccaaggaacctatgagtactgtcgc
tctgatgttgctggttatacgccagaagtgctgagtcactccatgggagagagttacata
cctgctccagttcatgtgggcggtttacgaaatcacaatagctcccccttagtcagtcta
ctctgtcgagaaggtattcttcgcgcggaggcattagatgaatttaatgcctttaaagcg
ggccaaataatgctgaaaacagagggaatattagtcgcgcctgagtcttcccatgcggtt
gctgctgccatcgatcttgcggaaaaagcacgcatagaaaacaaagaatctgtgattgtg
tttttagctagcggtaatggttttttggatctgcaaggttacaacgatgtattaaataat
tga

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