KEGG   Shewanella woodyi: Swoo_2562
Entry
Swoo_2562         CDS       T00676                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
swd  Shewanella woodyi
Pathway
swd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:swd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Swoo_2562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:swd03400]
    Swoo_2562
Enzymes [BR:swd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Swoo_2562
DNA repair and recombination proteins [BR:swd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Swoo_2562
 Prokaryotic type
     Swoo_2562
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 HHH_5
Other DBs
NCBI-ProteinID: ACA86839
UniProt: B1KGX0
Position
3134259..3134897
AA seq 212 aa
MNKEKRQAILSILRENNPHPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPIANT
AQSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK
TANVVLNTAFGWPTIAIDTHIFRVANRTKFAMGKNVDQVEEKMLKVVPAEFKVDVHHWFI
LHGRYTCVARKPRCGSCLIEELCEFKEKVYPE
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaataaagagaaacgacaagcgatcttatcgatcctcagagaaaataaccctcaccct
gaaactgagctaaatttttcgagcccctttgagctacttgtcgctgtgactctgtcagct
caggctaccgatgttagcgttaacaaagcaacagataagctctttcccatcgcaaatact
gcccaatctatctacgcgttaggggttgatggactcaaagagtatataaagaccattggc
ttatacaataataaagcaattaatgtcatcaaggcatgtgagatattaatcgagaagtat
aatggtgaagtacctgaagatcgtgaggcattagagtcccttcctggtgttggtcgtaaa
accgcaaatgttgtactaaacacagcttttggctggccaactatcgctattgatacccat
atttttcgtgtcgccaaccgcacaaaatttgccatggggaaaaatgtcgatcaggttgaa
gagaagatgttaaaagtcgttcctgcggagtttaaggttgatgtacaccactggtttatt
ctccatggccgctatacctgcgttgcccgcaaacctcgttgtggcagctgtctaatcgaa
gagctgtgcgagtttaaagagaaggtctatcctgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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