KEGG T00676: Swoo

Shewanella woodyi ATCC 51908: Swoo_2674

Entry

Swoo_2674 CDS T00676

Gene name

ddl

Definition

D-alanyl-alanine synthetase A (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

swd Shewanella woodyi ATCC 51908

Pathway

swd00473	D-Alanine metabolism
swd00550	Peptidoglycan biosynthesis
swd01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:swd00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:swd00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp RimK CPSase_L_D2 LptE

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3272758..3273837

AA seq 359 aa
MVAKNGDYAIVSQQLNIISGDQENMSQINLLLLCGGGGDEHAISLMSADFLETSLAKEPE
INLLRVELDGQGHYRTQDGRSCELTNRKEIRFAAEEQAPWPVDYVIPCIHGFPGETGDIQ
SYFDLIKLPFFGCDSESSSNCFNKVTAKMWFSALGVPNTPYIFLNELNQESIAQTKQALE
NWGSIFIKAASQGSSVGCYRVDSQDELVSSLEQAFSFSPYVIVEKTINARELEVAAYELN
GEIVATKPGEIICASNTFYSFDEKYAANSKAETKVEADVSEEVAQQIQAYAIKVFKGMKL
SHLSRIDFFLTEDNEILLNEINTFPGLTPISMFPKMLQNHGDDFTHYLYSNIKSQLVSA

NT seq 1080 nt +upstreamnt +downstreamnt
atggttgcaaaaaatggcgattacgccatagtgagccagcaactgaatattatctctgga
gaccaagagaacatgagccaaattaacctactcttattgtgcggcggtggtggagacgag
catgcgatttcgcttatgtctgcagacttcctcgaaacctcattggctaaagagcctgag
ataaatctattaagagtagaactggacggtcagggacactaccgaacccaagatggcaga
agctgtgagctcaccaaccgcaaagagatccgttttgctgctgaggagcaagcgccctgg
cccgtcgattatgtgatcccctgtattcacggcttccctggtgaaactggtgatattcaa
tcttatttcgacttaatcaaactacccttctttggttgtgactctgaatcaagtagtaac
tgcttcaataaggtgacagcaaagatgtggttcagtgcccttggagtgccgaatactccc
tacatcttcctcaatgagttgaatcaagagtctatcgcacaaactaaacaagcactggaa
aactggggctcaatctttattaaggctgcatcacagggttcatctgttggttgttaccga
gtcgacagccaagatgaacttgtctcaagtttagagcaagcattcagcttctctccctat
gttattgttgaaaaaaccattaacgcccgagagctcgaagtcgcagcttatgagttaaat
ggtgagatagtggcaaccaaacctggtgagatcatctgcgctagtaacaccttctacagt
ttcgatgagaaatacgctgctaacagcaaagctgaaactaaagtagaggcggatgtcagt
gaagaggtagcccagcagatccaggcctatgccattaaagtgtttaaagggatgaagttg
agccatctttcacgtatagacttctttttaacagaagataatgaaattttactcaatgag
atcaatacctttcctgggctaacgcctatctcaatgttccctaagatgctgcaaaatcat
ggtgatgactttacccattacctctactcgaacataaagtcacagctcgtatcagcgtag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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