KEGG T00676: Swoo

Shewanella woodyi ATCC 51908: Swoo_2702

Entry

Swoo_2702 CDS T00676

Definition

isocitrate dehydrogenase (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

swd Shewanella woodyi ATCC 51908

Pathway

swd00020	Citrate cycle (TCA cycle)
swd00480	Glutathione metabolism
swd01100	Metabolic pathways
swd01110	Biosynthesis of secondary metabolites
swd01120	Microbial metabolism in diverse environments
swd01210	2-Oxocarboxylic acid metabolism
swd01230	Biosynthesis of amino acids

Module

swd_M00009	Citrate cycle (TCA cycle, Krebs cycle)
swd_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:swd00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:swd00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3305861..3308083)

AA seq 740 aa
MTDNSTIIYTETDEAPALATLSLLPIIKTFTQAAGVNVETRDISLSGRVIANFPEKLSDS
QKIGDALAELGVLAGKPEANIIKLPNISASIPQLKACILELQNKGYDIPSYPDEPANDAE
REIKARFDKIKGSAVNPVLREGNSDRRAPGSVKKYAQKNPHSMGAWSTDSKSHVAHMSEG
DFYGSEKSLTLEADQQVNIVLAKADGTEQILKSSLGLLAGEVVDAAVMSKKALISYFERE
IDEAKNQGVLLSLHLKATMMKVSDPILFGHAVKVYYKELFAKHGELFEELGVDVNNGVGD
VYAKIAQLPAEQKAAIEADIAAIYESRPELAMVDSDKGITNLHVPSDVIIDASMPAAIRT
SGMMWGVDGQPKDTKAMIPDRCYAGVYQETISFCKEHGAFNPTTMGSVPNVGLMAQKAEE
YGSHDKTFEIPAAGTVKVVNGQGEVLLSHDVEAGDIWRMCQVKDAPIRDWVKLAVKRSRL
SSTPAVFWLDVNRSHDAEIIKKVNQYLPEHDTEGLDIRIMSPVEATRFTLARTKDGLDTI
SVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGHL
RWDSLGEFLALAASLEHLSQTTNNPKAQVLADTLDAAIGQFLDQNKSPSRRVGQLDNRGS
HFYLAMYWAQEVAKQTQDAELKAHFASLAESLTNNEAKIVDELNSAQGAAADLGGYYRLD
AAKASTEMRPSATLNGLFTA

NT seq 2223 nt +upstreamnt +downstreamnt
atgaccgacaattcaaccattatctatactgaaacagatgaagcaccggcactcgccacc
ctatctttactgcctatcattaaaacttttactcaagcggcaggcgtgaatgtagaaacc
cgtgatatctctctttcgggtcgagttattgcaaactttcctgagaaactatcagacagt
cagaaaataggtgatgcccttgctgagctgggtgttctagctggtaagcctgaagcgaat
atcattaagctaccgaatatcagtgcctctattcctcaactcaaagcgtgtattttagaa
ttacaaaacaaaggctacgatattccttcatatccagatgagcctgcaaatgatgcagag
cgtgaaataaaagcgcgttttgataagatcaaaggaagcgcagtaaacccagttcttcgt
gaaggtaactcagatcgtcgtgcaccaggttctgtaaagaaatatgcacagaaaaatcct
cattcaatgggtgcatggagcacagactctaaaagccacgttgcacatatgagtgaaggt
gatttttacggcagtgaaaagtccttaaccttagaggccgatcaacaggtcaacatagtg
ctggctaaggctgacggtactgagcagatcctgaagtcgtcgttgggattattagctggt
gaggtagttgatgctgctgtgatgagtaaaaaagcgcttatcagctactttgagcgtgag
attgatgaggcaaaaaaccaaggtgtgctgctttcacttcacttaaaagccaccatgatg
aaggtctccgatccaattttgttcggtcatgcggttaaagtttattataaagaactgttt
gcaaagcatggagagttatttgaagagctaggtgtcgatgttaataacggtgttggtgat
gtttacgccaagatagctcaacttccagctgagcaaaaagccgcgattgaagcggacatt
gctgctatatatgaaagccgtcctgagcttgcgatggttgattcagataaggggatcact
aatttacacgtaccaagtgatgtgattattgatgcttcaatgcctgccgcaattcgtaca
tcaggcatgatgtggggcgtggatggtcagccaaaagataccaaagcgatgatccctgat
cgttgttacgcgggtgtttatcaagagactatctctttttgtaaagagcatggcgcattt
aatccaacgaccatgggtagtgtaccaaacgttggtttgatggcccaaaaggcggaagag
tacggtagccacgataaaacatttgagatcccagcagcaggtaccgttaaggtggttaat
ggtcaaggagaagtgcttctttcccatgacgttgaagctggtgatatctggagaatgtgt
caggtaaaagatgcacctatccgtgactgggttaaacttgcagttaagcgttcacgccta
tcttcaacaccagcggtattctggttagatgtaaaccgtagtcatgatgcagagatcatt
aaaaaggttaatcaatatcttcctgagcatgatactgaagggctagatatccgtattatg
tctccggttgaagcgacacgttttaccttggcacgtactaaagatgggctcgacactatc
tctgtcactggtaacgtattgcgtgattacctaacagatctgttcccaattttagagctt
ggtacgagtgctaaaatgctctctatcgtaccgctaatgaatggcggtggattatttgaa
actggtgctggtggtagtgcacctaagcatgttcagcaagttgaaaaagagggtcacttg
cgttgggattcactaggtgagtttttggcattagcagcgtctcttgagcacctaagccaa
acgaccaataatcctaaagctcaggtgctagcagatacattggacgccgctatcggtcag
ttcctagatcaaaacaagtcgccttcacgtcgcgttggtcaactggataatcgtggcagt
catttctatcttgctatgtactgggctcaggaagtcgctaagcagactcaagatgcggag
cttaaagcgcactttgcttcactggcagaatctttgactaacaatgaagctaagattgtt
gatgagctgaactctgcgcaaggtgcagcagcagatcttggtggctattaccgtttagat
gctgctaaagcgtcaactgagatgcgtccaagtgcgacattaaatggattgtttactgca
taa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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