KEGG T00676: Swoo

Shewanella woodyi ATCC 51908: Swoo_2917

Entry

Swoo_2917 CDS T00676

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

swd Shewanella woodyi ATCC 51908

Pathway

swd00260	Glycine, serine and threonine metabolism
swd00400	Phenylalanine, tyrosine and tryptophan biosynthesis
swd01100	Metabolic pathways
swd01110	Biosynthesis of secondary metabolites
swd01230	Biosynthesis of amino acids

Module

swd_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:swd00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:swd00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3566576..3567394

AA seq 272 aa
MTESKQAGRYQAAFAKLEAKNQGAFVPFVTLGDPSPEISLKIIDCLVENGADALELGFPF
SDPLADGPVIQGANLRSLAAGTTPSQCFEMLSTIRAKYPELPIGLLLYANLVYANGIENF
YAKAQAAGVDSVLIADVPVEEAEPFITSAKAHGVAPIFIAPPNADSDTLKLVSEKGEGYT
YLLSRAGVTGTESKAGMPIDDILARLKEFNAAPPLLGFGIAEPAQVREAIQAGAAGAISG
SAVVKIIEANKDNETELLTKLGEFTRNMKAAT

NT seq 819 nt +upstreamnt +downstreamnt
atgactgaatctaaacaagcaggccgttatcaggcagcctttgccaaacttgaggcaaaa
aaccagggggcatttgttccttttgtcaccttaggcgaccctagccccgaaatatcttta
aaaattatcgactgtttagttgaaaatggcgccgatgcgttagagttaggctttcctttc
tcagacccattagccgatggcccggttattcaaggagccaacctacgctctcttgctgct
ggcaccacaccaagtcaatgctttgagatgctcagtacaattcgcgctaagtacccagag
ttacccatagggttgcttctgtacgcaaacttggtctatgccaatggtatcgaaaatttt
tatgcgaaagctcaagcggcaggtgttgattcagtgttgattgccgatgtacctgttgaa
gaggctgaacctttcatcacgtcagctaaagcccatggagtggcaccaatctttatcgct
ccgcccaacgcagacagtgacacattaaagctggtcagtgaaaaaggtgaaggatatacc
taccttctctcccgtgcaggagtgacgggcacagagtctaaagctggtatgccgattgac
gatattctcgctaggctaaaggagtttaacgcagccccgcccttgcttgggttcggtatt
gccgagcccgctcaagtgagagaagcgattcaagctggcgcagctggcgccatatcaggc
tctgcggtggtaaaaatcatcgaagcaaacaaagataatgaaacagagcttctcactaag
ttaggtgaatttacccgtaatatgaaggctgctacttag

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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