KEGG   Shewanella woodyi: Swoo_3153
Entry
Swoo_3153         CDS       T00676                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:swd03009]
    Swoo_3153
   03016 Transfer RNA biogenesis [BR:swd03016]
    Swoo_3153
Enzymes [BR:swd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Swoo_3153
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Swoo_3153
Ribosome biogenesis [BR:swd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Swoo_3153
Transfer RNA biogenesis [BR:swd03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Swoo_3153
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACA87424
UniProt: B1KMP6
Position
3868772..3869623
AA seq 283 aa
MSPTLPKIECHINVDSCEANAASLLANKSGLSKQQIKQAMTKGAVWHTRKHNTSRLRRGK
KSLKVGDELHLYYNQEVLEHQIDDAELIADMGQYSLWYKPYGMLCQGSKWGDHTTINRYS
ETHLTPDRPAFIVHRLDRAATGLVLIGHSKSITAALAKLFELRELDKYYQVIVEGRFNSG
REEVVTVDSDVDNKSACSHAKLLEYDAKQNRSLVQVKIDSGRKHQIRIHMASLGHPVVGD
RLHGIASGSDINLQLTSCYLKFPCPVTGEINEFELPERLRPKL
NT seq 852 nt   +upstreamnt  +downstreamnt
atgagtccaactctccccaaaattgaatgccacattaatgtcgactcatgtgaggccaat
gccgcttccttacttgctaataagagtgggttatctaagcagcagatcaaacaagccatg
accaaaggggcggtgtggcacacccgcaagcacaatacatcccgccttaggcgtggcaag
aaatcacttaaagtgggtgatgaactccacctatactataaccaagaggtgcttgaacat
cagattgatgacgctgaactcattgctgatatgggccagtacagcctctggtacaagccc
tacggtatgctatgccaaggttcaaaatggggtgaccacactaccatcaaccgctattca
gagactcacttgactccagatagacccgctttcattgtgcatcgtttagatagggctgcg
actggacttgttctgatcgggcatagtaaaagcataacggcagcattagctaagcttttc
gaactcagagaattagataaatattatcaggtaattgttgaaggccgattcaattcaggt
agagaggaggttgtcactgtagatagtgatgttgataataaatcagcctgttcacacgcc
aaattgcttgaatacgacgctaagcagaaccgttctctggtgcaggtcaagatcgactca
ggacgaaaacaccaaattcgtatccatatggcttctcttggtcatcctgtcgttggtgac
aggttacacggcatagccagcggttctgacatcaatctgcagctgacatcttgctatctc
aaatttccctgccctgtcacaggcgaaataaatgagtttgagctgccagagcgattacga
cctaagttgtaa

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