KEGG   Shewanella woodyi: Swoo_3411
Entry
Swoo_3411         CDS       T00676                                 
Name
(GenBank) pseudouridine synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
swd  Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:swd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:swd03009]
    Swoo_3411
Enzymes [BR:swd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     Swoo_3411
Ribosome biogenesis [BR:swd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Swoo_3411
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ACA87679
UniProt: B1KQS3
Position
complement(4172105..4172824)
AA seq 239 aa
MRLDKFLCKSTQLTRHEACELILAGKVLVNGESVVSPSAQVHENNHIRLEGGQRLTARAS
RYIMLHKPADTLSSNVDGDHPSVFNFINLEHTSELHIAGRLDADTTGLLLITDDGRWSFN
VFNPKYHCEKVYRVYLRDSIEGEIAGEIDAELKARFKQGLDLQGEQALTLPAKLEFVSPK
EVLLTITEGRYHQMKRMFARVGNRVNALHREQVGKIKLDMPVGQWRYLTREEIDSIPQY
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcgtctcgataaatttctatgtaagagcacacaactgacgcgccatgaggcctgtgaa
ctgatattggcaggcaaggtcttggtcaatggtgagtctgttgttagcccttctgctcag
gtccatgaaaataatcatattcgcttagagggtggccagcggcttactgcccgagcatct
cgctatatcatgttgcataaacctgccgacaccttaagttcgaatgttgatggcgatcat
cccagtgtgtttaattttatcaatttagagcataccagtgagttgcatattgcaggccgg
ttagacgctgataccacaggattactactgataaccgatgatggtcgttggtcatttaac
gtgtttaatcccaaataccattgcgaaaaggtgtatcgcgtttatttgcgagactctatt
gagggagagatagccggagagatagatgctgagcttaaagctcgttttaagcaggggtta
gacctacagggagagcaagcgctaactctgccagcaaagcttgagtttgtttcccctaaa
gaggtgctgctgactatcactgaggggcgataccaccagatgaagcgtatgtttgcgcgt
gtcggtaaccgagttaacgctttgcatcgagagcaggtgggaaagataaaacttgatatg
cctgttggtcagtggcgctacttaactcgtgaagagatagactcgattcctcaatactaa

DBGET integrated database retrieval system