KEGG   Shewanella woodyi: Swoo_3618
Entry
Swoo_3618         CDS       T00676                                 
Name
(GenBank) quorum-sensing autoinducer 2 (AI-2), LuxS
  KO
K07173  S-ribosylhomocysteine lyase [EC:4.4.1.21]
Organism
swd  Shewanella woodyi
Pathway
swd00270  Cysteine and methionine metabolism
swd01100  Metabolic pathways
swd01230  Biosynthesis of amino acids
swd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Swoo_3618
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swoo_3618
Enzymes [BR:swd01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.21  S-ribosylhomocysteine lyase
     Swoo_3618
SSDB
Motif
Pfam: LuxS DUF1805 PI-TkoII_IV
Other DBs
NCBI-ProteinID: ACA87882
UniProt: B1KD47
Position
complement(4413474..4413983)
AA seq 169 aa
MPLLDSFTVDHTRMNAPAVRVAKTMKSPSGDTITVFDLRFCAPNKDILSERGIHTLEHLY
AGFMRNHLNGDNVEIIDISPMGCRTGFYMSLIGSPKEADVAEAWLASMNDVLTVASQSEI
PELNEYQCGTFNMHSLEQAQGIARSIIASGISVNKNDELKLSEKILKGL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgccgttactggatagttttaccgttgatcatacccgaatgaatgcacctgcagttcgt
gtagctaaaaccatgaagagcccctctggtgataccattactgtctttgatctgcgtttt
tgtgccccgaataaagatatcctaagtgagcgtgggatccataccctagagcatctctac
gcaggctttatgcgtaaccaccttaatggcgataacgttgagattatcgatatctctccg
atggggtgtcgcaccggcttttacatgagcttaatcggctcgccaaaagaggctgatgtg
gcagaagcttggcttgcttctatgaatgatgtgctcactgttgcatcgcaatcggagatc
cctgagctcaatgagtaccagtgcggtacatttaatatgcattcgctcgagcaagcacag
gggatcgcgcgttcgattattgcttcagggatcagtgttaacaagaatgatgagctgaaa
ttaagtgagaagatccttaagggtctataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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