KEGG   Shewanella woodyi: Swoo_3889
Entry
Swoo_3889         CDS       T00676                                 
Name
(GenBank) D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
swd  Shewanella woodyi
Pathway
swd00260  Glycine, serine and threonine metabolism
swd00270  Cysteine and methionine metabolism
swd00680  Methane metabolism
swd01100  Metabolic pathways
swd01110  Biosynthesis of secondary metabolites
swd01120  Microbial metabolism in diverse environments
swd01200  Carbon metabolism
swd01230  Biosynthesis of amino acids
Module
swd_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:swd00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    Swoo_3889
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Swoo_3889
   00270 Cysteine and methionine metabolism
    Swoo_3889
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:swd04147]
    Swoo_3889
Enzymes [BR:swd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     Swoo_3889
    1.1.1.399  2-oxoglutarate reductase
     Swoo_3889
Exosome [BR:swd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Swoo_3889
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh ACT NAD_binding_2 AdoHcyase_NAD 3HCDH_N IlvN XdhC_C UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: ACA88147
UniProt: B1KFH2
Position
4740890..4742119
AA seq 409 aa
MAKHSLDKDKIKILLLEGVHQSAVDVFKRAGYSNIEYHKASLGEEALKASIKDAHFVGLR
SRTQLTEAVLSQAEKLVGIGCFCIGTNQVDLNYAEKLGVPVFNAPFSNTRSVAELVLGEI
IMLFRGIPQRNAMAHRGGWLKSATGSYEARGKTLGVIGYGHIGTQLGILAETLGMRVVFF
DIEDKLPLGNAQQIHSMQELMSLADVVSLHVPETPQTKEMIGEAELACMKKGSILINASR
GTVVDIDALASTLKAEKIAGAAIDVFPVEPKSNDDEFISPLRGLDNVILTPHVGGSTQEA
QENIGIEVAGKLAKYSDNGSTMTAVNFPEVSLAQHKDASRLLHIHHNRPGVLIKINQAFA
EKGINIAAQYLQTTAEIGYVVMEVDSDQADEALEQMKAIEGTIRTRLLH
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggcgaaacattcgctggacaaggataagatcaagatcctgcttttggaaggcgtccac
caatcagcggtagatgtattcaagcgtgctggttacagcaacatcgaataccacaaggca
tctcttggagaagaggcactcaaggcatcgataaaggatgcgcattttgttggcctaaga
tcacggactcaattgactgaagcggtattaagtcaggcggagaaactggtcggaattggt
tgtttctgtatcggtactaatcaggtcgatctcaactatgctgagaaactcggtgtgcct
gtattcaacgcgcccttctctaacacacgcagtgtggcagagctggtacttggcgagatc
atcatgctatttcgtggtattcctcagcgtaatgccatggctcatcgtggtggttggctt
aagagtgcaaccggtagctatgaagcccgtggcaaaacactcggtgtgataggttatggc
catattggtactcagttagggatcctagccgagaccttaggtatgcgtgtcgttttcttc
gatatcgaagataagctaccactgggcaatgcccagcagatccactcgatgcaggagctg
atgtctcttgccgatgtggtcagtctgcatgttcctgagaccccacaaaccaaagagatg
atcggtgaagcagagctggcttgtatgaaaaaaggcagcatcttaattaacgcctctcgc
ggtactgtggtcgacattgacgctctagcatcaacgcttaaagctgaaaagatagctggt
gcagccatcgacgttttccctgtagagcctaagtctaacgatgatgagtttattagcccg
ctacgtggtctagacaacgtaatcttaaccccacatgtgggcggcagcactcaggaagca
caggagaacataggtatcgaggttgctggcaagttggccaagtactctgataatggatca
accatgaccgcagtgaacttccctgaggtatcgttggcccagcataaagatgcttcacgt
ctgctgcatattcaccacaaccgccctggcgtgttgatcaagattaaccaagcgtttgcc
gagaaagggatcaatatcgcggcccagtatctgcaaacaacggctgaaattggttacgtt
gtgatggaagtggattcagaccaagccgatgaagcactcgagcagatgaaggccattgaa
ggcactattcgtactcgtctacttcactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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