KEGG T00676: Swoo

Shewanella woodyi ATCC 51908: Swoo_4923

Entry

Swoo_4923 CDS T00676

Definition

catalase domain-containing protein

Orthology

K03781

catalase [EC:1.11.1.6]

Organism

swd Shewanella woodyi ATCC 51908

Pathway

swd00380	Tryptophan metabolism
swd00630	Glyoxylate and dicarboxylate metabolism
swd00680	Methane metabolism
swd01100	Metabolic pathways
swd01110	Biosynthesis of secondary metabolites
swd01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:swd00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:swd00680]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:swd00380]

SSDB

Motif

Pfam:

Catalase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

5923440..5924432

AA seq 330 aa
MDSYRLVSFINTCLLTGVTVLSSSVFAADRSSAELVDAVNGTPDSASREAGKKVKLRNHA
KGFCTSGSFIPNPKLHNTLAIPFFKQAEIPITARFSLGGTNPHASDRGAGRFMSLKIDGD
KESLNFVTTNSPVFFASNLEEFFNFQTKVKQGAEGKQWLVDNQPNAKAFFDYIKTLPPSA
SFANSRYFGVNSFLFSANNGDIKPGRWSFEPVDGVVNLSQNQLDKLPNNFLKDELLTLIQ
QKPAIWDLYIQLAEPGDEINDPTVLWPETRQRLLVGQVLIDGSRDSESATMQCDRGIFNP
VLLPEGIKPSADPILNARTPAYIESFIRRQ

NT seq 993 nt +upstreamnt +downstreamnt
atggattcatatcgtcttgtttcgtttataaatacctgcttactgacaggtgtcaccgtg
ctttcatcttctgtattcgctgctgatagaagcagtgctgagctggtggatgccgtcaat
ggcacgcctgattcagccagtcgtgaggcgggtaaaaaagttaaattgcgcaatcatgcg
aagggtttttgcacttcagggtcgtttattcctaaccctaaactgcacaacaccttggct
attcccttttttaaacaagcagaaatacctatcaccgcacgtttctcccttggtgggaca
aatccacatgcatcggatagaggtgcggggcgctttatgtcgcttaagattgatggtgac
aaggagagccttaattttgtgacgactaattctccggtcttttttgccagtaatttggag
gagtttttcaactttcaaacaaaggtgaagcagggagctgagggtaaacaatggcttgtg
gataatcagccaaatgctaaagcgttttttgattacatcaaaaccttgccgccgagtgcc
agttttgccaatagccgctattttggggttaacagtttcctgtttagtgcaaataatggc
gatattaagcctggacgttggagttttgaaccggttgatggagtggttaatcttagccaa
aaccagcttgataagttaccaaacaacttcttaaaagatgaattgttaactcttattcaa
caaaagcccgctatctgggatctttatattcagttagcagagcccggtgatgagattaac
gaccccacagtattatggcctgagacacgccaacgcctgttagtcgggcaagtgttgatt
gatggcagcagagacagtgagagtgcaactatgcagtgtgacaggggaatatttaacccg
gtactattgcctgaagggatcaaaccttctgctgaccccatattaaatgctcgcactccc
gcctacattgaatcatttatccgccgccaatag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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