KEGG T00538: Swit

Sphingomonas wittichii: Swit_2727

Entry

Swit_2727 CDS T00538

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

swi Sphingomonas wittichii

Pathway

swi00260	Glycine, serine and threonine metabolism
swi00400	Phenylalanine, tyrosine and tryptophan biosynthesis
swi01100	Metabolic pathways
swi01110	Biosynthesis of secondary metabolites
swi01230	Biosynthesis of amino acids

Module

swi_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:swi00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:swi00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth PcrB BtpA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3009985..3010800

AA seq 271 aa
MTRLAETFARTRAEGRAALVTFVTGGDPTPGDMGPILDALVAGGADVIELGMPFTDPMAD
GPAIQRANLRALGAGTTTADLLAIAAAFRQRHPSVPLVLMGYANPMVRRGPEWFAAEAAK
AGVDGVICVDIPPEQDGALGPALRAAGVAPIRLATPTTDAARLPAVLEGASGFLYYVSVA
GITGMQQAGQASIEAAVARFKAATDLPVAVGFGVRGPEQAEAIGRVADGVVVGSAIVDLI
GEHGAAAAGPVRDFTATLSAALRRAAQEKAA

NT seq 816 nt +upstreamnt +downstreamnt
atgacccgcctcgccgagaccttcgcccgcacccgcgccgaggggcgggccgcgctcgtc
accttcgtcaccggcggcgatccgacccccggcgacatgggaccgatcctcgacgcgctg
gtcgcgggcggcgccgacgtgatcgagctgggcatgcccttcaccgatccgatggccgac
ggcccggcgatccagcgcgccaacctccgcgcgctcggcgcggggacgaccaccgccgac
ctgctggcgatcgccgccgccttccgccagcgccacccctcggtgccgctggtgctgatg
ggctatgccaatccgatggtccggcgcggccccgaatggttcgccgccgaggccgccaag
gccggggtcgacggggtaatctgcgtcgacatcccgcccgagcaggacggcgcgctcggc
ccggcgctgcgcgcggccggggtcgccccgatccgcctcgccaccccgaccaccgacgcc
gcccggctgccggcggtgctggagggcgcgtcgggcttcctctattatgtctcggtggcg
gggatcaccggcatgcagcaggccggacaggccagcatcgaggcggcggtcgcgcgcttc
aaggcggcgaccgacctgccggtcgcggtcggcttcggtgtgcgcgggcccgagcaggcc
gaggcgatcggccgcgtcgccgacggcgtcgtcgtcggttcggcgatcgtcgacctgatc
ggcgagcatggcgccgccgccgcgggcccggtccgcgatttcaccgccaccctcagcgcg
gcgctgcgccgcgccgcccaggagaaggccgcatga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SWI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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