KEGG   Rhizorhabdus wittichii RW1: Swit_4041
Entry
Swit_4041         CDS       T00538                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
swi  Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:swi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:swi03016]
    Swit_4041
Enzymes [BR:swi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Swit_4041
Transfer RNA biogenesis [BR:swi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Swit_4041
 Prokaryotic type
    Swit_4041
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ABQ70385
UniProt: A5VDL9
Position
complement(4446148..4446912)
AA seq 254 aa
MTRFRLTVEFDGRPFMGWQRQAHGPSVQQAIEEAITAVTGERAVIHAAGRTDARVHGRAM
TAHADIAKPITPFRLKEALNARLRPAPVAILACEPVAGDWHARFSCVGRRYVYRIVNRRA
PLTFDAGLAWQVAADLDDQAMHAAAQCLVGRHDFTTFRSAHCQAESPVKTLDRLDVRRSG
ELIEIEAAARSFLHHQVRSMVGCLALVGRGRWTAADLADALAAADRARLGLNAPPDGLYF
MEAVYPAETGETAR
NT seq 765 nt   +upstreamnt  +downstreamnt
atgacccgcttccgcctgaccgtcgagttcgacgggcgccccttcatgggctggcagcgg
caggcgcacggccccagcgtccagcaggcgatcgaggaggcgatcaccgccgtcaccggc
gagcgggcggtgatccacgccgccgggcggaccgatgccagggtccatggccgggcgatg
accgcgcatgccgacatcgccaagccgatcacgccgttccggctgaaggaggcgctcaac
gcgcggctgcgccccgcgccggtcgcgatcctcgcctgcgagccggtcgccggcgactgg
catgcccgcttctcctgcgtcggccggcgctacgtctaccgcatcgtcaaccgccgcgcg
ccgctgaccttcgacgccggcctcgcctggcaggtcgcggccgacctcgacgaccaggcg
atgcacgcggcggcgcagtgcctcgtcgggcggcacgacttcaccaccttccgttcggcg
cattgccaggcggaaagcccggtcaagacgctcgaccggctcgacgtgcgccgttcgggc
gaactgatcgagatcgaggcggcggcgcgctccttcctccatcaccaggtccgctcgatg
gtcggctgcctcgcgctggtcggccggggccgctggaccgccgccgacctggccgacgcg
ctggcggcggcggaccgcgcccggctcggcctcaacgcgccgcccgacgggctctatttc
atggaagccgtctatccggcggaaacgggggaaaccgcccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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