KEGG   Syntrophomonas wolfei: Swol_0612
Entry
Swol_0612         CDS       T00396                                 
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
swo  Syntrophomonas wolfei
Pathway
swo00550  Peptidoglycan biosynthesis
swo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:swo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Swol_0612
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:swo01002]
    Swol_0612
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:swo01011]
    Swol_0612
Enzymes [BR:swo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Swol_0612
Peptidases and inhibitors [BR:swo01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   Swol_0612
Peptidoglycan biosynthesis and degradation proteins [BR:swo01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   Swol_0612
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Peptidase_S13 Beta-lactamase Transpeptidase
Other DBs
NCBI-ProteinID: ABI67941
UniProt: Q0AZB3
Position
705423..706568
AA seq 381 aa
MCCRRSIAWLVLWVMVFIIAAPTRLEAEVVEVKAESYVLMDADSGKVLLAKNEHKQLAPA
SMTKLMTLILAMEALEEGKVTLKDKVVTSENAWKMGGSQIYLEPGEQMSYEDMLIAIAVG
SANDACVAVAEHLEGTHQNFVDKMNHKAKMLGLKNTHFINSYGLSAPKHYTSAYDMAVIG
REALAHPKILEYSSIKEYDLRQGEFKLFNTNKLLWWYQGADGFKTGWTDEAKYCLAGTAK
RDGLRLISVVMASPEKHGNFRDSMQLLNYGFARYAFKSLIGQGKSCGIVKIGKGIEEQVE
VLAEEEVGCTVIKGEEKKINSKTSLLPYVDAPVSKGQKLGEISLYKDGDLIKEINLVAAS
DVGRGGLLKEIGKIFAEIYLL
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtgttgcagaaggagcatcgcctggcttgtcttgtgggttatggtatttattattgct
gctccaactaggctggaggccgaggtggtggaagtaaaagcagagtcttatgttctaatg
gatgctgattccggcaaagtactgctggctaaaaatgaacataaacaattagctcctgct
agcatgaccaagctgatgactttgattctggctatggaagccctggaggaagggaaagta
accctgaaagacaaagtcgtgaccagtgagaatgcctggaagatggggggttcccagatt
tatctggagccgggagaacagatgagctacgaagatatgctcatagccatagctgttggt
tcggccaatgatgcctgtgtagccgtggctgaacacctggaaggcacgcaccagaacttt
gtggataaaatgaaccataaagctaaaatgctgggcttgaagaatacccactttatcaat
tcttatggccttagtgctcccaaacactataccagtgcttatgatatggcggtaattggc
cgtgaggcgctggcccaccctaaaatattagagtacagttctatcaaagaatatgatctc
aggcagggagaattcaagctatttaataccaacaaactgctctggtggtaccagggggcg
gatggttttaaaaccggatggactgatgaggccaaatattgcctggcaggaaccgccaaa
agagatggcttgcgcctgatttccgtggtcatggcatccccggagaaacatggcaatttc
cgggattccatgcagcttttaaattatggttttgcccgttatgcttttaagagcctgatt
ggccagggtaaaagctgtggaattgtaaaaataggcaaaggtatagaggagcaggtagaa
gtgctagcggaagaagaagttggctgcacggtaatcaagggagaagaaaagaagataaac
agcaaaacctcattgcttccttatgttgatgctccggtaagtaagggacagaagttaggt
gaaatctcgctatataaagacggagatttgattaaagaaataaacctggtggcagccagt
gatgtcggtcgcggaggattgcttaaggaaatcgggaaaatatttgccgaaatctatcta
ttataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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