KEGG   Syntrophomonas wolfei: Swol_0961
Entry
Swol_0961         CDS       T00396                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
swo  Syntrophomonas wolfei
Pathway
swo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:swo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Swol_0961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:swo03400]
    Swol_0961
Enzymes [BR:swo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Swol_0961
DNA repair and recombination proteins [BR:swo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Swol_0961
 Prokaryotic type
     Swol_0961
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH HHH_8 Med23
Other DBs
NCBI-ProteinID: ABI68276
UniProt: Q0AYC8
Position
1087344..1087967
AA seq 207 aa
MQRSIEIIKCLKKEYPEAGTLLQHSSPFQFMVAVVLSAQSTDEQVNRVTAELFADYGTPE
ALAAIDLSLLEEKIRGVGLYRNKARHLKKMAQIIVEQYQGEVPSDFDELLSLPGVGRKSA
NVIRSVVFKKPGLGVDTHVHRVANRLGLVNSKLPEQTEKALKEQIPEKCWSEAHHLLIFH
GRRICQARKPQCNNCVLEGLCEKRFEK
NT seq 624 nt   +upstreamnt  +downstreamnt
ttgcagcgtagtattgagataattaagtgtttaaaaaaggaatatcctgaggccggcact
ctgctccagcatagcagtccctttcaatttatggtggcggtggttctttcggcacagagc
accgatgaacaggtaaaccgggttacggcggagctgtttgctgattacggaacccctgaa
gctctagcggcaatcgatttgtctctattagaagagaagattcggggagtggggttgtac
cggaacaaagcccgtcatctcaaaaagatggcgcaaataatagtggagcaataccaggga
gaggtgccttccgatttcgatgaattattgagccttcccggtgtagggcgcaagagtgct
aatgtgataaggtcggtagtgtttaaaaaacccggtctgggcgtggatacccatgtacac
cgggtggccaaccgcctgggcttggtgaacagcaagctccctgagcagacggaaaaagcc
ttgaaagagcaaattccggaaaaatgctggagcgaagcccatcatcttttgattttccac
gggcgtcggatttgccaggcccgcaagccgcagtgtaataattgcgtattagaggggctt
tgcgagaaaaggttcgagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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