KEGG   Syntrophomonas wolfei: Swol_2016Help
Entry
Swol_2016         CDS       T00396                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
swo  Syntrophomonas wolfei
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:swo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Swol_2016
Enzymes [BR:swo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Swol_2016
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Swol_2016
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2309876..2310682)
Genome map
AA seq 268 aa AA seqDB search
MPELPEVETIKNNLQEILPLRIKELEIRREDILRCRDYALEELTGQIIEEASRRGKYLIL
AVDNGLFLVFHLGMSGRLYIQEEETTVLEPHVHVIIHLDKRLKLLYQDARRFGGLWLLKD
TQCFFSRLGKEPLSEEFCPRYLEQVLQGRQTAIKNLLLNQNLISGIGNIYADEALFMAGI
RPDRQAASLSVREIEGLCCGIKEVLAKSIKYRGTTFRDYRDGKRQPGEFQNHLQVYGRFN
QACPNCGQPLKRSRIGGRSSHYCEKCQQ
NT seq 807 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccggaggtcgagacgatcaagaataacctgcaggaaattctgccgctt
agaatcaaagaactagaaatccggcgtgaggatatattacgctgccgggactatgccctg
gaagagcttactggtcagatcatagaagaagcgtcccgccggggcaagtatcttatcctg
gccgtggacaacggcctgttcctggtttttcacctgggtatgagcggcaggctttatata
caagaggaagaaactacggttctagaaccgcatgtgcatgtgataatccatttggataag
cggcttaagcttttataccaggatgctcgtcgtttcggggggctatggctgcttaaggat
acccaatgcttcttttcccggctgggaaaagagcctttgagtgaggagttttgcccccgc
tacctggaacaggttttgcaaggacgccaaactgccataaaaaatctgcttttgaatcag
aaccttatctctggcatcggcaacatctatgccgatgaagccctgtttatggcggggatt
aggcctgatcgccaggctgcttccctttctgtgcgagagattgaaggcttgtgctgcggc
atcaaagaagttttggcaaagagcattaaatatcgtggcaccacttttcgcgattaccga
gacggtaagcgacaaccgggggagttccaaaaccacctgcaagtctatggccgttttaat
caagcctgccccaactgcggccagcctctgaaaagaagcagaatcggtggcagaagcagc
cattactgcgagaaatgccagcagtaa

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