KEGG T00791: swp

Shewanella piezotolerans WP3: swp_3085

Entry

swp_3085 CDS T00791

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

swp Shewanella piezotolerans WP3

Pathway

swp03410	Base excision repair
swp03420	Nucleotide excision repair
swp03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:swp03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:swp03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:swp03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

212635862

NCBI-GeneID:

7034085

UniProt:

B8CPT7

Position

complement(3229295..3230188)

AA seq 297 aa
MTKVRKRSSNRKLLRFLNWQFLLFISFISISANLKASEISKPPLQLATEFIAESTVQLDD
FLVSEKLDGVRGYWDGSSMRSRSGRKINLPDWFTKGFPDYPVDGELWIGRNQFEQVSAII
RKTHATKAQWQQVRFMVFDLPGETSHFAKRYQKALAELSDISTHIEVIPQFSVRDKLTLD
RRLSDIIENNGEGLMLHRKTALYQVGRTGDIVKLKPFYDAEARVLAHKEGKGKYIGMMGA
LLVETKQGKQFSIGSGFSDEDRRNPPKVGSTITFKYYGETQKGTPRFASFLRVRDPI

NT seq 894 nt +upstreamnt +downstreamnt
atgacaaaagttagaaagcgaagttcaaatagaaagctgttacggtttttgaattggcaa
tttctactgttcattagctttatttctatatccgcgaatttaaaagcgagtgaaatatca
aagccacccttgcaacttgctactgaatttatagctgagagtacggttcagttagatgac
tttttagtgagtgaaaaacttgatggtgtaagaggttattgggatggtagtagcatgcga
tctcgatcggggcgaaagattaacctgcctgattggtttactaaagggtttcccgattat
ccagttgatggtgagttatggataggtcgtaatcagtttgagcaggtgtctgcgattatt
cgaaagactcatgccaccaaggcgcaatggcagcaggttagatttatggtgtttgacttg
cctggggaaacatctcattttgcaaaaaggtatcaaaaggcgcttgctgagctgtctgat
attagtactcatattgaggttatcccgcagttttcagttagagataaattaacgttagat
cgtcgactctctgatattattgaaaataatggtgaaggcttgatgttacatagaaaaact
gcgctttatcaggttggtcgcaccggcgatattgtaaagttaaaacccttctatgacgca
gaagctagagtactggctcataaagagggcaaggggaaatacatcggtatgatgggggct
ttgttggtggaaactaagcagggcaaacaatttagcattggcagcggctttagtgatgaa
gatcgccgtaacccgccaaaagtgggtagcacgattacatttaagtattatggtgaaaca
caaaaaggcacgcctcgatttgcaagtttcctgcgggtaagagatcccatttag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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