KEGG   Staphylococcus xylosus HKUOPL8: BE24_01555
Entry
BE24_01555        CDS       T03248                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sxy  Staphylococcus xylosus HKUOPL8
Pathway
sxy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sxy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BE24_01555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxy03400]
    BE24_01555
DNA repair and recombination proteins [BR:sxy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BE24_01555
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BE24_01555
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 P-loop_SecA AAA_22 Kinesin TrwB_AAD_bind AAA AAA_16 UB2H AAA_25 UvrD-helicase AAA_7 HEM4 EMC3_TMCO1 HerA_C
Other DBs
NCBI-ProteinID: AID00828
Position
316992..318974
AA seq 660 aa
MEHYPFELHSDFEPRGDQPEAIKKIVNGVNEGKRHQTLLGATGTGKTFTMSNVIKQVGKP
TLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEI
DQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYRDLVVSVRVGMEMDRSELLRKLVDV
QYTRNDIDFKRGTFRVRGDVVEIFPASREEMCIRVEFFGDEIDRIREVNYLTGEVLRERD
HFAIFPASHFVTREEKMKLAIQRIENELEARLTELRSENKLLEAQRLEQRTNYDLEMMRE
MGFCSGIENYSVHLTLRPTGSTPYTLLDYFGDDWLVMIDESHVTLPQIRGMYNGDRARKQ
VLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPFELEHTDEMVQQIIRPTGLLD
PKIEVRPTENQIDDLIGEIQDRIDRNERVLVTTLTKKMSEDLTTYLKEAGIKVNYLHSEI
KTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSQRSLVQTIG
RAARNSRGEVIMYGDKITDSMRYALDETERRRTIQETYNEKYNITPTTINKKIHDVISAT
VDNDETNERQQTEVPKKMTKKEREKTIANIEKEMKKAAKDLDFEKATELRDMLFELKAEG
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggaacattatccgtttgaactgcattctgattttgagcctcgaggtgatcaaccagaa
gccattaaaaaaattgtgaatggtgtcaatgaaggaaaaagacatcaaacgttacttgga
gctacaggtacaggtaaaacttttacaatgagtaacgttattaagcaagtgggtaaacct
acgttaattatcgcgcacaataaaactcttgcaggtcaattatatagcgaatttaaagag
tttttccctgaaaatagagtggaatattttgtcagctattatgattattatcaaccagaa
gcttatgtgccatcgactgatacttttatagaaaaagatgcctcaattaatgatgaaata
gatcaattacgacactcagcaactagtgcattatttgaaagagatgacgttattatcata
gcaagtgtcagctgtatttatggtctgggtaatcctgaagaataccgtgatttagtcgta
agtgttcgtgttggcatggaaatggacagaagcgaattactgagaaaattggttgacgtg
caatatacaagaaatgatattgattttaaacgtggtacgttccgcgttagaggcgatgta
gtggaaatcttcccagcctcaagagaagaaatgtgtataagagtagaattttttggtgat
gaaatagatcgcattcgtgaagttaactacttaacgggcgaagtattaagagaacgagac
cattttgctattttcccagcctcacacttcgtaacacgtgaagaaaaaatgaaattagct
atccaaagaattgaaaatgaattagaagcacgtttgactgaattacgttctgaaaataaa
ttgttagaagcacagcgcttagaacagcggacgaactatgatttagaaatgatgagagaa
atgggtttttgttcaggcatagaaaactattccgttcatctaactttaagaccaacaggt
tcaactccatatacgcttctagattactttggtgatgattggttagtgatgattgatgag
tcacatgttacattaccgcaaattagagggatgtataatggggatcgcgctcgtaaacaa
gtactggtagaccatggtttccgtttaccaagtgctttagataatagaccattaaaattt
gaagaatttgaagagaagaccaaacaattagtctatgtatctgctacaccaggtccattt
gaattagaacatacagatgagatggtacagcaaattattcgaccaacaggtttattggat
cctaagattgaagttcgaccaactgaaaatcaaattgatgatttaattggagaaattcaa
gatcgtattgatcgaaacgaacgtgtgctagtaactactttaactaaaaaaatgagtgaa
gatttaactacttatttgaaagaagcaggaataaaagttaactatctacactcagaaatt
aaaacattagaacgaattgaaattattcgtgacttgagaatgggcacatatgatgtcata
gtcggaattaatttattaagagagggtattgatataccagaagtatctctcgtagtgata
ttagatgcagataaagaaggattcttgcgttcacaaagatcacttgttcaaacgattgga
cgtgctgcacgtaatagtcgtggtgaagttattatgtatggtgataagattactgattct
atgcgttatgcgttggacgaaacggaaagacgtcgcacaatccaagaaacatataacgaa
aaatataacattacgcctacgactatcaataagaaaatacatgatgtgattagtgctact
gtcgataacgatgaaactaatgagcgacaacaaacggaagttcctaagaagatgacgaaa
aaagaacgcgaaaaaacaattgcaaatatagaaaaagaaatgaaaaaagcggcgaaagat
ttagatttcgaaaaagctacagagcttagggatatgttatttgaattaaaagcagaaggg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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