KEGG   Sphingobium yanoikuyae: A6768_01930
Entry
A6768_01930       CDS       T05170                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A6768_01930 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sya03400]
    A6768_01930 (xth)
Enzymes [BR:sya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     A6768_01930 (xth)
DNA repair and recombination proteins [BR:sya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     A6768_01930 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ATI78877
UniProt: A0A177JPJ6
Position
412125..412901
AA seq 258 aa
MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDAGYGVIWHGQK
GFNGVAILARGDQPVEVRRGLEGEPEDEQSRYLEADVKGVRVASIYLPNGNPQPGPKFDY
KLRWMKRLRERAAEIWAEEVPAILAGDYNVIPRDVDIYSPKAMADDALMQPESREAYRRL
LGDGWTDSILTRHPAGGVWTYWDYQAGAWPRDAGFRIDHLLLSPAAADRLVDAQVDKAFR
GREKASDHAPTWVELRDI
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcgtatcgccaccttcaacatcaacggcatcaaggcgcggctgccgcgcctgctggaa
tggctggacgagacccggcccgacatcgcctgcctgcaggaaatcaagacgtccgacgag
accttcccggtcaaggatatcgaggatgccggctatggcgtgatctggcacgggcagaag
ggcttcaacggcgtggccatcctggcgcgcggcgaccagccggtggaggtacgccggggc
ctggagggcgagcccgaggacgagcagagccgctatctggaagccgatgtgaagggggtg
cgggtcgccagcatctacctgcccaacggcaatccgcagccggggccgaaattcgattac
aagctgcgctggatgaagcggctgcgggaacgggcggcggaaatctgggcggaggaagtg
cccgccatcctggccggcgactataatgtcatcccgcgcgacgtggatatctattcgccc
aaggcgatggcggacgatgcgctgatgcagcccgaaagccgggaggcctatcgccggctg
ctgggcgacggctggaccgattcgatcctgacccgccatccggccgggggcgtgtggacc
tattgggactatcaggccggggcctggccgcgcgacgcgggcttccgcatcgatcatctg
ctgctgagcccggcagcggccgaccggctggtcgacgcccaggtcgacaaggcgtttcgt
ggccgggaaaaggcgagcgatcatgcgccgacctgggtcgaactgcgcgatatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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