KEGG   Sphingobium yanoikuyae: A6768_25750
Entry
A6768_25750       CDS       T05170                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A6768_25750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sya03400]
    A6768_25750
Enzymes [BR:sya01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A6768_25750
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A6768_25750
DNA repair and recombination proteins [BR:sya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A6768_25750
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ATI83070
UniProt: A0A291N7F5
Position
5529557..5530369
AA seq 270 aa
MPELPEVETTVSGLRSVLQGATLTRVEPRRADLRFPIPVDLRQRMTGATVTGLSRRAKYG
LIETDRGDMMIFHLGMSGRWRIDPAEIGAHDHLLLETGNGHLLSLNDPRRFGSLDLVRSD
AWQGYAPFTRMGPEPLGPDFDAAYLAKVLDGKATSIKAALLDQRMVAGLGNIYVCEALNM
AGIAPTRAAGRISKRRLGSLVEAIRTVLSAAIVAGGSTLRDYARPDGELGYFSNQWRVYG
REGQICPCGGTVQRRVDGGRSTFHCPKCQK
NT seq 813 nt   +upstreamnt  +downstreamnt
atgccagagcttcccgaagtcgaaaccaccgtttccggcctgcgatccgtcttgcagggc
gcgaccctcacacgggtcgagccgcgccgcgccgatctgcgcttcccgattccggtggac
ctgcgtcagcgtatgaccggcgccaccgtcacgggactgtcgcgccgggccaaatatggc
ctcatcgaaaccgatcgcggcgacatgatgatcttccacctcggcatgtcggggcgatgg
cgaatcgatccggcggaaatcggggcgcatgaccatctgttgctggagacgggcaacggg
catcttctctcgctcaacgacccgcgccgcttcggctcgctggatctggtgcgcagtgac
gcctggcagggctatgcccccttcacccgcatggggccggagccattggggccggatttc
gacgcggcctatctggcgaaggtgctggatggcaaggcgacgtcgatcaaggcggcgctg
ctcgaccagcgcatggtcgcgggcctgggcaatatctatgtatgcgaagcgctgaacatg
gcgggcatcgccccgactcgagcggcgggccgcatatcgaagcgccggctcggctcgctg
gtggaggcgattcgcacggttctgtccgccgccatcgtcgccggcggttccaccctgcgc
gattatgcgcggccggatggcgaattgggctatttctccaatcaatggcgagtctatggg
cgcgagggacagatttgtccctgtggcggcaccgtgcaacgccgagtcgatggggggcga
tcgaccttccattgccccaaatgccagaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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