KEGG   Synechococcus sp. CC9605: Syncc9605_0597
Entry
Syncc9605_0597    CDS       T00292                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
syd  Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:syd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syd03032]
    Syncc9605_0597
   03400 DNA repair and recombination proteins [BR:syd03400]
    Syncc9605_0597
Enzymes [BR:syd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Syncc9605_0597
DNA replication proteins [BR:syd03032]
 Prokaryotic type
  DNA Topoisomerases
   Syncc9605_0597
DNA repair and recombination proteins [BR:syd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Syncc9605_0597
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4
Other DBs
NCBI-ProteinID: ABB34371
CyanoBase: Syncc9605_0597
Position
577798..580497
AA seq 899 aa
MAHTLVIVESPTKAKTIRGFLPKGFKVEASMGHVRDLPNNASEIPASAKGQKWANLGVNI
EADFEPLYVVPKDKKKTVRELKDALKGADQLLLATDEDREGESISWHLLQLLAPKVPVKR
MVFHEITKEAIGKALDQTRDLDMELVHAQETRRVLDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVQRERARRAFRSGSYWDLKAQLEQSGSAFEAKLTHVGGQRIATGNDFDESTG
GLKAGSAVRLLSESEAKALAESVRSSAWTVDAVEEKPTVRKPVPPFTTSTLQQEANRKLR
LSARETMRCAQGLYERGFITYMRTDSVHLSDQAINASRNCVETLYGKEYLSKGPRQFSTK
ARNAQEAHEAIRPSGESFRTPGETGLDGRDLAVYELIWKRTVASQMAEARLTMLSVDLSS
GEASFRASGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPALSVGDAPEPKTVEPLGHQT
QPPARFSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYATLLGNALTPSFTAFAVTALLE
EHFPELVDTSFTARMENTLDEISHGKVQWLPYLEGFYKGDEGLENQVQQREGDIDPGASR
TIDLEGLSSVVRIGRFGAYLEAKRVSDDGEEELIKATLPREITPADLDEEQAELILKQKA
DGPEAIGEDPETGDLVYLLSGQYGPYVQRGQVSDENPKPKRASLPKGQKPEDLTLEDALG
LLRLPRLLGEHPEGGRIQAGLGRFGPYVVWDKGKGDKDYRSLKGDDDVLAVGLSRAIELL
AMPKRGRGGRTALKDLGKPEGSDETIQVYDGPYGLYVKQGKVNASLPEGKGADDVTLEEA
VELLVAKAASKKGGRKTAAKKPAAKKPAAKKPAAKKPPATTKTGRLRASAVRVIKPADN
NT seq 2700 nt   +upstreamnt  +downstreamnt
gtggcgcacaccctcgtcatcgttgagagccccacgaaggccaagaccatccgtggcttc
cttcccaagggattcaaggtcgaagcctccatggggcatgtccgtgaccttcccaacaac
gccagcgagattccggcatcagccaaggggcagaaatgggccaacctcggtgtgaacatc
gaagcggatttcgagccgctttacgtagtcccgaaggacaagaagaaaacggttcgcgaa
ctcaaggacgccctcaagggtgctgatcagttgctgttggcgacggacgaagaccgggag
ggtgaaagcatcagttggcatctgctccagctgctggcgccgaaggtgccggtgaagcgc
atggtgtttcacgagatcaccaaggaggccatcggcaaggccctggatcagacccgcgat
ctggacatggagctggtccatgcccaggaaacccggcgcgttttggatcgccttgtgggg
tacaccctgtcccctctcctctggaaaaaggtggcctggggactctccgccgggcgggtg
cagtccgttgcggttcgtctcctggttcaacgggaacgggcccgccgcgccttccgcagc
ggcagctactgggacctcaaggcccagcttgaacagtcgggcagtgcctttgaggccaag
ctcacccatgtgggtggccagcgaatcgccaccggcaacgatttcgacgagagcaccggc
gggctgaaggcgggcagtgctgtgcggctgctcagcgagagcgaggccaaggcgttggct
gaatccgtgcgatccagcgcctggactgtggatgcggtggaggagaagcccaccgtgcgc
aagccggtgcctcccttcaccaccagcaccctccaacaggaggcgaatcgcaagctgcgc
ctctcagcccgggaaaccatgcgctgtgcccaggggctctatgaacgcggtttcatcacc
tacatgcggaccgactcggttcacttgtcggatcaggcgatcaacgcatcccgcaactgc
gtggagaccctctacggcaaggagtatctgagcaaagggccgcggcagttcagcaccaaa
gcccgcaatgcccaggaggcccatgaagcgattcgtccatcgggcgaaagcttccgaacc
cccggtgagaccggacttgatgggcgagatctggcggtctacgagctgatttggaagcgc
accgtggccagccagatggctgaagccaggctcaccatgctgtcggtagatctcagctca
ggtgaggccagtttccgggccagcggcaagcgcatcgacttccccggtttcttccgcgcc
tacgtggagggcagtgatgatcccgacgcggccctcgagggtcaggaagtgctgctgccg
gcgttgagcgttggcgatgcaccggagccgaagaccgttgagcccctcggccatcaaacc
cagcccccggcacgcttcagtgaggcatcgctggtgaagatgctggaaaaggaaggaatc
ggccggccgtcgacctacgcctcgatcattggaacgatcgtggatcgcggctacgccacg
ctgctgggtaatgccctgacccccagcttcaccgcctttgcggtgacggcgctgctcgag
gagcatttccctgaactggttgacaccagcttcaccgcccggatggagaacacccttgat
gagatctcccacggcaaggtgcagtggctgccgtacctcgagggcttctacaagggtgac
gagggtcttgaaaaccaggtgcagcagcgggagggagacatcgatcccggtgcatcccgc
accatcgatctggagggcttgtcctccgtggttcgtatcggccggtttggcgcttacctg
gaggccaaacgggtcagcgacgacggtgaggaagagctgatcaaggccaccttgccccgg
gagatcactccggctgatctggatgaagagcaggccgaactgattctcaaacagaaggcc
gacggccccgaagccatcggtgaggatccggaaacgggggatttggtctacctgctctcc
ggtcagtacggcccttatgtgcagcgggggcaggtgagtgatgagaatcccaagcccaaa
cgcgcgtctctgcccaaggggcagaagcccgaagatctcaccctggaggatgccctcgga
ctgctccgcttgccgcgtcttctcggcgaacatcccgaaggtggtcgcattcaggcgggg
ctgggtcgctttggcccctatgtcgtctgggacaagggcaagggcgataaggattaccga
tcgctcaagggggatgacgatgttctggcggtggggctgagccgagccatcgagctgctg
gccatgcccaaacggggtcggggtggacgcaccgccctaaaggatctcggtaagccggag
ggcagtgatgaaacgattcaggtctatgacggcccctacggcctgtacgtcaaacagggc
aaggtgaatgcctccctgccggaaggcaagggtgctgacgatgtgacccttgaggaggcg
gtggaacttcttgtcgccaaggcagcatcgaagaagggcggtcgtaaaaccgctgcgaaa
aaaccggcggccaagaagccagctgccaaaaaaccagccgccaagaaacctcctgccacc
accaagaccggtcggctcagggccagtgcggtgcgggtgatcaagccggctgacaattga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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