KEGG T00293: Syncc9902

Synechococcus sp. CC9902: Syncc9902_1747

Entry

Syncc9902_1747 CDS T00293

Gene name

groEL

Definition

molecular chaperone GroEL

Orthology

K04077

chaperonin GroEL

Organism

sye Synechococcus sp. CC9902

Pathway

sye03018

RNA degradation

Class

Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:sye03018]

SSDB

Motif

Pfam:

Cpn60_TCP1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

CyanoBase:

CYORF:

UniProt:

Position

1679160..1680848

AA seq 562 aa
MAKLLSFSDESRSSLERGVNALANAVRVTIGPKGRNVVLEKKFGAPDIVNDGDTIARDIE
LEDPFENLGAKLIQQVASRTKDKAGDGTTTATVLAQAMVREGLRNTAAGASPVELRRGME
KAAAQVVAGLASRSQAVEGDSIQQVATVSSSGDEEVGRMIAEAMDRVSVDGVITVEESKS
LATEMEVTEGMAFDRGYSSPYFVTDADRQVCEFENPLILLTDRKISTVIDLVPVLEAVQK
SGSPLLILSEEVEGEALATLVMNKSRGVLQVAAVRAPSFGDRRKAALADIAILTGGTLIS
EDQAMTLDKVTLEDLGHARRVTISKESTTIVANDNHSEAVSNRVAAIKRELDATESDYDR
EKLNERIAKLAGGVAVIKVGAATETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQL
AEDLNALAAQLDGDQRTGVEIVQRSLTAPVHQIATNAGHNGDVVIETMRQSGQGFNALTG
VYEDLMATGIVDATKVVRLAVQDAVSIASLLVTTEVVIADKPEPEPPAGAGGEDPMGGMG
GMGGMGGMGMPGMGGMGMPGMM

NT seq 1689 nt +upstreamnt +downstreamnt
atggccaaacttctttctttctccgacgaatcacgcagttcccttgagcgtggtgtgaac
gcccttgccaatgctgtccgagtcaccatcggacccaagggtcggaatgtcgttctcgag
aagaaatttggcgccccagacatcgttaatgacggcgataccattgcccgcgatatcgag
ctggaagatccttttgaaaatctcggcgccaagctgattcaacaggtggcatccagaact
aaagacaaagctggagacggcaccaccacggccacggttttagctcaggccatggttcgc
gaaggactccgcaacacagcagcaggagctagccctgtagagcttcgtcgtgggatggag
aaagcggcagcacaggtggttgccggtttggcgagccgaagtcaggccgtcgaaggtgat
tccatccaacaggtggccacggtgagttccagtggcgatgaagaagtgggtcggatgatc
gctgaagcgatggatcgggtcagcgtggacggcgtcatcaccgttgaagaatccaaatcg
ctcgccaccgaaatggaggtgactgaaggcatggcattcgatcgcggatacagctcgccc
tatttcgtcacggatgctgatcgtcaggtttgtgaattcgaaaatccattgatcctgctg
accgatcgaaagatcagcaccgtcatcgatttagtgcccgttcttgaagcggttcaaaaa
agtggctcgccgcttttaatcctctcggaagaggtggagggggaagccctggccaccttg
gtgatgaacaagagccgtggcgtcctccaagtggcagcagtgcgtgctccttccttcgga
gaccgtcgcaaagcagccttggctgatatcgccatcctcacggggggcaccttaatcagc
gaagaccaagcgatgactctcgacaaggtgacgctcgaggatctcggtcacgcccgtcgg
gtgacgatcagcaaagagagcaccaccatcgttgcgaatgacaatcacagtgaagcggtg
agcaatcgtgttgccgcaatcaagcgagagctcgacgcgacagagtcggattacgaccgc
gaaaagctgaatgagcggattgccaaactggccggtggtgttgccgtcatcaaggtgggt
gctgcaacagaaaccgaactgaaaaaccgcaaactgcgaattgaagacgccctgaatgcc
acccgtgccgctgtggaagaaggaatcgtggctggaggcggaagcacgttgcttcagctc
gctgaagacctcaacgccctagcggcacaactggacggcgatcaacgcaccggcgtagaa
attgtgcagcgatcactcaccgcacccgtccaccagatcgcaaccaatgcaggacataac
ggtgacgtggtgatcgaaacgatgcgccaaagcggtcagggattcaatgccctaacgggt
gtgtacgaagacttgatggcgacaggcatcgttgatgccaccaaagttgttcgacttgca
gtacaggacgcggtgtcgattgcatccctgctggtcacaactgaggtagtgattgctgac
aaaccagaaccagaacctcctgctggagctggaggtgaagatcccatgggtggaatgggc
ggcatgggtggcatgggcggtatgggtatgcctggcatgggcggcatgggcatgcctgga
atgatgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-SYE (1)   
   CYORF-SYE (1)   
   JGI-SYE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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