KEGG   Synechococcus sp. CC9311: sync_1630
Entry
sync_1630         CDS       T00390                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
syg  Synechococcus sp. CC9311
Pathway
syg03030  DNA replication
syg03430  Mismatch repair
syg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    sync_1630 (dnaE)
   03430 Mismatch repair
    sync_1630 (dnaE)
   03440 Homologous recombination
    sync_1630 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syg03032]
    sync_1630 (dnaE)
   03400 DNA repair and recombination proteins [BR:syg03400]
    sync_1630 (dnaE)
Enzymes [BR:syg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     sync_1630 (dnaE)
DNA replication proteins [BR:syg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     sync_1630 (dnaE)
DNA repair and recombination proteins [BR:syg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     sync_1630 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABI47874
CyanoBase: sync_1630
UniProt: Q0I9N7
Position
complement(1492504..1496028)
AA seq 1174 aa
MAFVPLHNHSDYSLLDGASQLPQMVGRAKELGMPALALTDHGVMYGAVELLKLCKGAGIK
PIIGNEMYVINGSIDDPQPKKERRYHLVVLAKNATGYRNLVKLTSISHLRGMRGRGIFSR
ACVDKQLLKQYGEGLIVATACLGGEIPQAIMRDRPDVARDVALWYQQTFGDDFYLEIQDH
GSPEDRIVNVEIVRIAKELGIPLIATNDAHYLTRNDVEAHDALLCVLTGKLISDVKRLRY
TGTEYLKSEEEMSRLFVDHLEPDVVAEAISNTVQVADKVEDYDILGRYQMPRFPIPEPHT
PVSYLREVTEQGLRNRLEIDSETAIDPNYGDRLSHELKIMEQMGFPTYFLVVWDYIRFAR
EQGIPVGPGRGSAAGSLVAYALGITNIDPVSNGLLFERFLNPERKSMPDIDTDFCIERRG
EVIDYVTRRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYGDADRLAKLIPVVRGKPAK
LAAMIGEESPNPEFREKYKKDPVVKRWVDMAMRIEGTNKTYGVHAAGVVIAADPLDELVP
LQRNNDGQVITQYFMEDVESMGLLKMDFLGLKNLTMIDKTLELVAATIGEKVDPDKLPLE
DPETYALLARGDLEGIFQLESTGMRQIVRDLKPSSLEDISSILALYRPGPLDAGLIPKFI
NRKHGRETIDFAHHSIEPILQETYGIMVYQEQIMKIAQDMAGYSLGEADLLRRAMGKKKV
SEMQKHRGIFVQGASDRGVDKKVADELFDQMVLFAEYCFNKSHSTAYGAVTYQTAYLKAH
YPVAYMAALLTVNAGASDKVQRYISNCNAMGIEVMPPDINASGIDFTPKGDRILFGLSAV
RNLGDGAIRAVIGSRESEGAFQSLADLCDRLPSAVLNRRSMESLIHCGAMDALEPEANRA
QLMADLDLLLDWATSRAKDRASGQGNLFDLMAAASSDGAEDAGTDLSLAPKAPPVKDYHP
TEKLRLEKDLVGFYLSDHPLKQLTPPAKLLAPIGLGSLEEQADKAKVSAIAMVSEMRQVT
TRKGDRMAVLTLEDLTGSCEAVVFPKSYARLADHLMAEARLLVWAAVDRRDERVQLIVDD
CRAIDDLRLLMVELDPEQASDVAVQHKLRECLQAYRPDQEQLGVRVPVVAAVRQGNTVRY
VRLGPQFCVRDASAAALHLQEKAFKVKCSEPLLN
NT seq 3525 nt   +upstreamnt  +downstreamnt
atggcatttgttcccctccataaccacagcgattacagccttttagacggagcctcacag
ctccctcagatggttggccgtgccaaagagttagggatgccggcactggcactcactgat
cacggagtgatgtatggagccgtagagcttctcaagctgtgcaaaggagcaggcatcaag
ccgattattggcaatgagatgtatgtcatcaatggttcgattgatgacccgcaacccaaa
aaagagcgccgctatcacctcgtggttctggccaagaatgccactggctatcgcaacttg
gtgaagctcaccagcatcagtcacctgcgtggaatgcgaggacgaggaattttttcccgt
gcatgtgttgataaacagttgctgaagcaatatggcgaaggtttgattgtggccaccgct
tgtctcggcggtgaaattcctcaggcgatcatgcgtgatcgtcctgatgtggcacgtgat
gtggctctttggtatcagcaaacattcggcgatgacttttacttagaaattcaggatcac
ggctcacctgaagatcgcattgtcaatgtagaaatcgttcggattgcaaaagaactagga
atccctttaatcgcaaccaatgatgctcactatctcacgcgtaacgatgttgaagcacat
gatgccttgctctgtgttttgacaggcaagttgatcagcgatgttaaaaggttgcgttat
acgggaaccgaatatcttaaaagtgaagaggagatgtcacggctctttgtagaccatctt
gagccggatgtggtggcggaagcgatcagtaataccgtgcaagttgctgacaaagtagag
gattacgacatccttggtcggtatcagatgccgcgttttccaatcccagagccacatact
cctgtgagctatttgcgggaagtaactgagcagggtttacgcaatcgtttggagattgat
tccgaaacggccattgatccgaactatggagatcggttgtcccatgagttaaagatcatg
gaacagatgggattccccacctacttccttgtggtgtgggattacatccgctttgcacga
gagcagggaattcctgttggaccggggagaggctcagcggctggatcactggtggcctac
gccctaggaatcaccaatattgatcctgtcagtaatggcctgttgttcgagcgattcctg
aatcctgaacgtaagtcaatgcctgatattgataccgatttctgtatcgaacgccggggt
gaagtgattgattacgtcacccgtcgctatggcgaagacaaagtggctcagatcatcacg
tttaaccgcatgacgtccaaggcggtcctgaaagatgtggcaagagtgcttgatatcccc
tatggagatgccgatcgattagcaaaattgattccggttgttcgcggtaaacctgccaag
ttggcagcgatgatcggcgaggaatctcccaatcctgaatttcgcgagaagtacaaaaag
gatccagtggtgaagcgctgggttgatatggcgatgcgtattgaagggaccaacaaaacc
tatggagttcacgctgcaggagttgtgattgcagcggatcctctcgatgaacttgttcca
cttcaaagaaataatgatgggcaggtcattactcaatacttcatggaagatgtggagtcg
atgggacttctaaagatggatttcttgggtctcaaaaatctcacgatgattgataaaact
ctggagttggtcgccgccacgatcggagaaaaggtcgatccagacaagcttccattagaa
gatcctgaaacgtacgccctgcttgcccgtggtgacttagagggaatcttccagctggaa
tcaacgggaatgcgtcaaatcgttcgtgatctcaagccctcatccttggaggacatttcc
tcgattttggctctttaccgacccggtcctttagatgcaggcttgattccaaaatttatc
aatcgcaagcatggccgtgagactattgattttgcgcatcactcgattgaaccaatcctt
caagagacctacgggatcatggtttatcaagagcaaattatgaaaattgctcaagacatg
gctgggtattccttgggtgaagctgatttgcttcgtcgcgccatgggcaagaaaaaagtg
tcagaaatgcagaaacatcgtgggatctttgtgcaaggtgcttccgatcgtggtgtggat
aaaaaagttgctgatgaactctttgaccaaatggtgttattcgctgaatattgctttaac
aaaagccactccacggcctacggagctgttacttatcaaacggcctatctaaaagctcat
tacccggtggcttacatggctgccttgctcacagtgaatgctggagccagcgataaagtg
cagcgttacatctccaattgcaatgcgatgggcatcgaagtgatgcctcccgacatcaat
gcatcagggattgacttcactcctaagggtgatcgcatcctgtttggtttgtcagctgtt
cggaatctcggcgatggagcgatccgtgccgtgatcgggtctagagaatcagaaggcgcg
ttccaatcactcgctgatctctgtgatcgtcttccttctgcggtgctgaatcgcagaagt
atggagtcgctgatccattgcggggcgatggatgctcttgagcccgaggcgaatcgggct
caactgatggccgatttagatctccttcttgattgggccacgtcgagggccaaagatcgg
gccagtgggcagggcaatttgtttgatctgatggcagcagcctccagtgatggtgctgag
gatgcgggaacggatctcagcttggcgccaaaggctcctccggtgaaggattaccacccc
accgaaaagcttaggctggagaaggatctggttggtttctatctctctgatcacccgtta
aaacagctcactcctccggcgaagcttttggctcccattgggctagggagtcttgaagaa
caagccgataaagccaaggtcagcgcgatcgcaatggtgagtgagatgcgccaggtcacc
actcgcaagggagatcgaatggcggtcttgaccctcgaagacctcactggatcctgtgaa
gcggtggtctttcccaaaagctacgcacgtttggctgatcacctaatggctgaggctcgt
ttgctggtttgggcagctgtggatcgccgcgacgagcgggtgcaactgatcgttgatgac
tgccgggccatcgacgatctacgtctactgatggtggaacttgatccagaacaggccagc
gatgtggcggtccaacacaaattgcgtgaatgtcttcaggcctaccgtccagatcaggaa
cagttgggagttcgcgttcccgttgttgccgcagttcgacagggcaatacggttcgctat
gtgcggcttggacctcagttttgtgtacgcgacgcatccgctgcagcgcttcatctccaa
gagaaggcttttaaggtgaagtgcagcgaacctctactgaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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