KEGG   Synechococcus sp. CC9311: sync_2282
Entry
sync_2282         CDS       T00390                                 
Name
(GenBank) GroEL chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
syg  Synechococcus sp. CC9311
Pathway
syg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    sync_2282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syg03019]
    sync_2282
   03110 Chaperones and folding catalysts [BR:syg03110]
    sync_2282
   03029 Mitochondrial biogenesis [BR:syg03029]
    sync_2282
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:syg04147]
    sync_2282
Enzymes [BR:syg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     sync_2282
Messenger RNA biogenesis [BR:syg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     sync_2282
Chaperones and folding catalysts [BR:syg03110]
 Heat shock proteins
  HSP60 / Chaperonin
   sync_2282
Mitochondrial biogenesis [BR:syg03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    sync_2282
Exosome [BR:syg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   sync_2282
  Exosomal proteins of other body fluids (saliva and urine)
   sync_2282
  Exosomal proteins of breast cancer cells
   sync_2282
  Exosomal proteins of colorectal cancer cells
   sync_2282
  Exosomal proteins of bladder cancer cells
   sync_2282
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: ABI45474
CyanoBase: sync_2282
UniProt: Q0I7U3
Position
complement(1997748..1999379)
AA seq 543 aa
MAKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGID
KASDFLVGKIQENAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLEEGK
SMETELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIA
RTGKPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMIEDMAVLTNGQLI
TEDQGLKLENAKLEMLGTARRVTINKDTTTIVAEGNEVAVSTRCEQIKKQMDETDSTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHM
APALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNEGYNA
ANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKEAAAAGGGMGGD
FDY
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggctaagcgcattatttataacgagaacgctcgccgtgctctcgaaaaaggcatcgac
attcttgccgaagctgtcgcagtaaccctcggtccaaaaggccgcaatgtggtactcgag
aaaaaatttggtgctccccagatcatcaatgatggagtcacgatcgctaaagagatcgag
cttgaggatcacatcgaaaacaccggtgttgctctcatacgtcaggctgcatccaaaacc
aacgatgctgctggagatggcacaacaactgccaccgttttggctcatgccatggtgaaa
gcaggcttgcgcaatgtggcagccggcgctaacgcaatcactttgaagaagggtattgat
aaggcttccgatttcttggttggaaagattcaagaaaatgcaaagccgattgcagacagc
aacgcaattgctcaggttggcacaatctccgccggcaatgacgaagaagttggcaagatg
attgctgacgccatggataaagttggcaaagaaggcgtgatttctcttgaagaagggaaa
tccatggagaccgagcttgaggtcactgagggtatgcgtttcgataagggttatatctcc
ccttatttcgcaacagacacggagcggatggaagcggttcttgatgagccttacatcctc
ttaaccgacaaaaagatcggattagtacaagatttggttcctgtgcttgagcaaattgct
cgcactggaaagcctcttctgatcattgctgaggatatcgagaaagaagctctcgccacc
ttggtagtgaaccgcttgcgcggtgtgctcaatgtggcagccgtgaaggctcctggtttc
ggtgatcgccgcaaggcaatgatcgaagatatggcagtcctgaccaacggtcagttgatc
acggaagatcaaggcctgaagctcgaaaacgccaagctggagatgttgggtactgcccgt
cgcgttaccatcaacaaagacaccaccaccattgttgccgaaggcaatgaggttgctgta
agcacgcgttgcgagcagatcaagaagcagatggatgagaccgattccacctatgacaaa
gagaagcttcaggagcgtcttgccaaattggctggtggcgttgctgttgtgaaggtggga
gcagccaccgagaccgagatgaaggacaagaaacttcgtctcgaagatgccatcaacgcc
actaaagcagccgttgaggagggcatcgttcctggtggtggtacaaccttggctcacatg
gcaccagccttggaggagtgggcagcctccaacctgtccggcgaggagttgatcggtgcc
aacatcgtggcctcagcgttgactgctcctctgatgcgcatcgctgaaaatgctggcgtg
aacggtgctgtcgttgctgaaaacgtcaagtccaagtcctttaacgagggctacaacgcg
gccaacggcgagtatgtcgacatgctttctgcaggcattgttgatcctgccaaggtgact
cgttcaggtttgcaaaatgctgcttcgatcgctggcatggtgttaaccacagaatgcatc
gtggctgatatgccagagaagaaagaagctgctgctgctggtggcggtatgggcggcgac
ttcgactactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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