KEGG   Synechococcus sp. WH 8109: Syncc8109_1861
Entry
Syncc8109_1861    CDS       T03783                                 
Symbol
lpdA
Name
(GenBank) putative dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
syh  Synechococcus sp. WH 8109
Pathway
syh00010  Glycolysis / Gluconeogenesis
syh00020  Citrate cycle (TCA cycle)
syh00260  Glycine, serine and threonine metabolism
syh00280  Valine, leucine and isoleucine degradation
syh00310  Lysine degradation
syh00380  Tryptophan metabolism
syh00620  Pyruvate metabolism
syh00630  Glyoxylate and dicarboxylate metabolism
syh00640  Propanoate metabolism
syh00785  Lipoic acid metabolism
syh01100  Metabolic pathways
syh01110  Biosynthesis of secondary metabolites
syh01120  Microbial metabolism in diverse environments
syh01200  Carbon metabolism
syh01210  2-Oxocarboxylic acid metabolism
syh01240  Biosynthesis of cofactors
Module
syh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
syh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:syh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Syncc8109_1861 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Syncc8109_1861 (lpdA)
   00620 Pyruvate metabolism
    Syncc8109_1861 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Syncc8109_1861 (lpdA)
   00640 Propanoate metabolism
    Syncc8109_1861 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Syncc8109_1861 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Syncc8109_1861 (lpdA)
   00310 Lysine degradation
    Syncc8109_1861 (lpdA)
   00380 Tryptophan metabolism
    Syncc8109_1861 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Syncc8109_1861 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:syh04147]
    Syncc8109_1861 (lpdA)
Enzymes [BR:syh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Syncc8109_1861 (lpdA)
Exosome [BR:syh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Syncc8109_1861 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_2 FAD_oxidored NAD_binding_8 Thi4 3HCDH_N DAO FAD_binding_3 HI0933_like Lys_Orn_oxgnase UDPG_MGDP_dh_N Pyr_redox_3 AlaDh_PNT_C 2-Hacid_dh_C COX2
Other DBs
NCBI-ProteinID: AHF64213
UniProt: W0GZ07
Position
complement(1366383..1367825)
AA seq 480 aa
MSDASFDFDVIVIGAGYGGFDAAKHAAEHGLKTAIVESRDMGGTCVNRGCVPSKALLAAS
GKVRELADDKHLASFGIHAAPVRFERQKIADHANQLVQTIRTNLTKTLERAGVTILRGHG
RLEGSQKVGLREPSGVDRVLTAKDVIIATGSDPFVPPGIETDGRTVFTSDEAINLEWLPR
WIAIIGSGYIGLEFADVYTALGCEVTMIEAMDKVMPTFDPDIAKIAGRHLIDGRDIDARS
GLLARKVIPGCPVQIELADFNSRELVETLEVDAVLVATGRVPSSKGLNLESLNVETNRGF
VPIDDAMRVLVNGQPVPHLWAVGDVTGKLMLAHTAAAQGTVAVDNILGHAREIDYRSIPA
ATFTHPEISSVGLTEADAKALAEKDGFQLGSVRSYFKANSKALAELDSDGLMKLLFNKTS
GEVLGAHIYGLHAADLIQEVANAVARRQSVRQLATEVHTHPTLSEVVEVAYKQAAAQLAA
NT seq 1443 nt   +upstreamnt  +downstreamnt
gtgagcgacgccagcttcgacttcgacgtcattgttattggggccggctacggcggcttc
gacgctgctaaacatgccgctgaacacggcctgaagacggcgatcgttgaatcccgcgat
atgggtggcacctgtgtgaacaggggctgtgttccctccaaggcgctactggccgccagt
ggaaaagtgcgggaactggcggacgacaagcacctcgcgagcttcggaattcatgctgct
cctgtgcggttcgagcggcagaagatcgctgatcacgccaatcagctggttcagaccatt
cgcaccaacctcaccaaaacccttgaacgggcaggggtgacgatcctccgaggccacggg
cgtctagagggcagccagaaggtggggctgcgggagcccagcggggtggatagggtactg
accgccaaggacgtgatcatcgccacgggctctgatccctttgtgccgccaggcatcgaa
accgatggccgcacggtgttcaccagtgacgaagccatcaacctggaatggctgccccgt
tggatcgccatcatcggcagcggttacatcggccttgaattcgctgatgtgtacaccgcc
ctcggttgcgaggtcacgatgatcgaggccatggataaggtgatgcccacctttgatccc
gacatcgccaagatcgctgggcgtcatctgattgatggtcgcgatatcgatgcgcgttcc
ggtctgctggcccgtaaggtcatcccgggctgtcccgtgcagatcgaactggctgatttc
aacagccgcgaattggtggagacccttgaggtggatgccgttctggtggccacagggcga
gttcccagcagcaagggcctcaacctggagtcgctcaatgtggagacgaaccgtggcttt
gtcccgattgacgacgccatgcgcgttctggtcaacggccaacctgttccccatctctgg
gccgtcggcgatgtgaccggcaagctgatgctggcccacacggctgctgcccaaggcacc
gttgcggtggacaacatccttggccatgcgcgcgagatcgattaccgcagcattccggca
gccaccttcacccatcctgagatcagctctgttggcctgaccgaggcggatgccaaagct
ttggcggagaaggatggcttccagcttggttccgttcgcagctacttcaaggccaattcc
aaagctctggcagagctggacagcgatggcctgatgaagctgctgttcaacaaaaccagt
ggtgaagtgcttggtgcccacatctatggtctgcatgccgccgacctgatccaggaggtg
gctaatgccgttgcccggcgccagagcgtgcgtcagctcgccaccgaagtgcacacccac
ccgaccctcagcgaggtggtggaggtcgcctataagcaagctgccgcccagctggccgcc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (87)   

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