KEGG   Sediminicola sp. YIK13: SB49_01960
Entry
SB49_01960        CDS       T04145                                 
Name
(GenBank) polyphosphate kinase
  KO
K00937  polyphosphate kinase [EC:2.7.4.1]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00190  Oxidative phosphorylation
syi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    SB49_01960
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SB49_01960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syi03019]
    SB49_01960
Enzymes [BR:syi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.1  ATP-polyphosphate phosphotransferase
     SB49_01960
Messenger RNA biogenesis [BR:syi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SB49_01960
SSDB
Motif
Pfam: PP_kinase_C PP_kinase_C_1 PP_kinase PP_kinase_N PLDc_2
Other DBs
NCBI-ProteinID: ALM06708
UniProt: A0A0S1S9D1
Position
421068..423152
AA seq 694 aa
MIKSKYQYINREISWLQFNERVLQESADKNVPLIERLRFVGIFSNNLDEFFKVRYATVKR
IVEAGRSGKSVLGGEIAKDLLEEITEIVIRQQTKSLKILGDIEKELETKNIFLINEKEIK
DSQAEFIRSYFAQKVSPVLMTIILNDLAEFPTLKDTAAYLAVKIILKKDEKHPTEDGKKE
KRYALIEIPKGIDRFVVIPSQEDKSYIIMLDDLIRYSLGNIFNMFNYESITAHMIKITRD
AELDIDNDLSKSFIEKISSSVEHRKISDPVRFVYDKNIGRDTLEFLKDKMNIEDTDSVIP
GGRYHNRRDYMGFPSLGREDLMYEKIKPLPIKDFSMEGSLFNLIAKKDYLQYTPYHTFSY
VIRFLREAALDPKVKSIKITVYRLADNSQVTASLINAVKNGKQVTVQIELQARFDEQANI
QYAEQLQAEGVKLIFGVPGLKVHSKICLIEREEDGVNKRYGFISTGNFNEATARIYTDYT
LFTAHDPILKELNMVFDFFETTYKINKYKHLIVSPHYTKNVFKKLIDKEIENAKAGKEAY
IKIKMNSFTSYKMVDKLYEASKAGVKIQLIIRGICCLVPGVKGLSENIEAISVVDKFLEH
PRVFIFSNNGDPKVYISSADWMTRNLDYRVEVGCPIYDPELKQELLDTFEISWMDNVKAR
VFSANQDNAYRKNNKVKVRSQFAIYDYYLKKLNA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgatcaaatccaaataccaatatatcaaccgggaaataagctggttgcaatttaacgaa
cgcgtattacaggaaagtgcagacaagaacgtccctttgatagagaggctgagatttgtt
ggaattttctctaataatttagatgaattttttaaagtacgatatgccacggttaaaaga
attgtcgaagccgggagatctgggaagagtgttctagggggagaaattgcaaaagaccta
ttggaggaaatcacggaaatcgtaattaggcagcagaccaaaagtttaaagatacttggt
gacattgaaaaggaattggagaccaaaaatatctttttgatcaatgaaaaggagataaaa
gacagtcaggccgaatttatcaggagttactttgctcaaaaagtgagtccggtattaatg
accattatcctcaatgatcttgccgaatttccaacgctaaaggatacagcagcctatctt
gccgttaaaataatcttgaaaaaagacgaaaagcatccaacggaggacgggaaaaaggaa
aaacgttatgcccttatagaaatcccaaaaggtatagaccgttttgttgtcattccgagc
caagaggataagagttatatcatcatgttggatgatctgattcgatactccttgggcaat
atctttaatatgttcaattatgagtctatcactgcccacatgatcaagattacccgtgat
gcggaacttgatatagacaatgatttgagcaagagttttattgagaaaatttcatccagc
gtagagcacagaaagatcagtgatcctgtccgttttgtctatgacaaaaatataggaagg
gacaccttggaatttttaaaggataaaatgaacattgaggatacggatagcgttattccc
gggggacgatatcacaatagaagggattatatgggctttcccagtttgggacgtgaagat
ctgatgtatgaaaaaattaagccgctgcccataaaggatttttcaatggaggggagtttg
ttcaatcttattgcaaaaaaggattacctgcaatacactccataccataccttttcctac
gttattaggtttttaagggaagcagccttggaccctaaagtgaaaagcataaaaattaca
gtatatcgtttggcagacaattcacaggtcacagcctccctgatcaatgctgtaaaaaat
ggcaaacaggttacggtacaaatagaacttcaggccagatttgatgagcaggcaaatatc
caatatgcagaacaattacaggcagaaggggtaaagctcatctttggggttccaggatta
aaggtacacagcaaaatatgtcttatagaacgggaggaagacggagtgaataaacgttac
ggatttatcagtacgggtaactttaacgaagctacggcaaggatctatacagattataca
ctttttaccgctcatgatcctatattaaaagagctgaatatggtttttgatttcttcgaa
accacatataagatcaataaatacaaacatctcattgtttcgccgcactacaccaaaaat
gtgttcaagaaactgatagataaggagattgagaatgccaaagcgggtaaggaggcgtat
ataaagatcaaaatgaacagtttcacctcttataagatggtggataaattatatgaggcc
agcaaggccggggtgaagattcaattgataataagaggaatctgttgcctcgtgccagga
gtaaaagggttgagtgaaaatattgaagccattagtgttgtggataaatttttggaacat
ccaagggtattcatattttctaataatggagaccctaaagtgtatatatcctcagcagat
tggatgacaagaaatctagattaccgggtggaggtaggatgtccaatttatgatcctgaa
ttaaaacaggagctattggatacttttgagatttcttggatggataatgtcaaggcgaga
gtcttcagtgccaatcaggataatgcctataggaaaaataacaaagtcaaggtgcgttcc
cagtttgcgatttatgactattaccttaaaaaattaaacgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system