KEGG   Sediminicola sp. YIK13: SB49_09615
Entry
SB49_09615        CDS       T04145                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SB49_09615 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syi03019]
    SB49_09615 (groEL)
   03110 Chaperones and folding catalysts [BR:syi03110]
    SB49_09615 (groEL)
   03029 Mitochondrial biogenesis [BR:syi03029]
    SB49_09615 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:syi04147]
    SB49_09615 (groEL)
Enzymes [BR:syi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SB49_09615 (groEL)
Messenger RNA biogenesis [BR:syi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SB49_09615 (groEL)
Chaperones and folding catalysts [BR:syi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SB49_09615 (groEL)
Mitochondrial biogenesis [BR:syi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SB49_09615 (groEL)
Exosome [BR:syi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SB49_09615 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   SB49_09615 (groEL)
  Exosomal proteins of breast cancer cells
   SB49_09615 (groEL)
  Exosomal proteins of colorectal cancer cells
   SB49_09615 (groEL)
  Exosomal proteins of bladder cancer cells
   SB49_09615 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ALM08028
UniProt: A0A0S1SBL7
Position
2160134..2161762
AA seq 542 aa
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPMVTKDGVTVAKEIE
LADPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVTDLAKQTKKVGDSSEKIKQIASISANNDDTIGELIAQAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMMTNLENPYILLFDKKISSMKDLLPVLEPV
AQSGKPLLIVAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENATLDMLGTCEKVTIDKDNTTIVNGAGNANDIKTRVNQIKSQIESTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLAAVKVENADEETGLQIVARAIESPLRTIVENAGGEGSVVVAKVIEGKGHFGYDA
KTETYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVDIKEETPAGPPMGGGMPG
MM
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcaaaagatataaaatttgatattgaagcacgtgatggcctaaaaagaggcgttgat
gccttggcaaatgcggtaaaagtaaccttaggaccaaaaggaagaaacgtaatcatcagc
aaatcctttggcgcccctatggtgaccaaagatggtgttaccgttgctaaagaaatagaa
ttggcagatcccttagaaaatatgggagctcaaatggtaaaagaagttgcctccaaaacc
aacgatcttgctggagacggaacaactactgcaaccgtattggcccaagctattgtaaaa
gaaggattaaagaacgttgccgctggagcaaatccaatggatcttaaaagaggtatagac
aaagctgttgaggctatcgttaccgatttggccaaacaaaccaaaaaagtcggtgattct
tctgaaaaaataaaacaaatagcctccatttcagccaataacgatgataccattggggaa
cttattgcccaggcttttggaaaagtaggaaaagaaggtgttatcactgttgaggaagct
aaaggaacagacacgtatgtagatgttgtggaaggtatgcaattcgatagagggtaccta
tctccatactttgtgacagattctgaaaagatgatgaccaatttagagaatccgtatatt
cttttatttgacaagaaaatatcttccatgaaggatttgcttcctgttttggagccggta
gcccaatcaggtaagccgcttttgattgttgctgaagatgttgacggagaagctttggct
accttggtagtgaacaaactaagaggttctttaaaaattgcagccgttaaggctccagga
tttggagacagaagaaaagccatgttggaagacatcgctatcttaaccggtggtactgtt
atttctgaagaaagaggattctctttggaaaatgccactttggatatgttgggtacttgt
gaaaaagtaaccatcgacaaagacaatacaacaattgttaatggtgccggaaatgcaaac
gacatcaaaacaagggttaaccaaattaagtctcagattgaaagtacaacctcagattac
gataaagaaaaacttcaggaacgtttggccaaattggccggtggggtagctgtactttat
gtaggtgctgcttctgaagttgaaatgaaagagaaaaaagaccgtgttgatgatgcccta
catgccactagagctgcagtagaagaaggtattgttgctggtggtggagttgccctggta
cgcgccaaagcagttcttgctgctgtgaaggtagaaaacgcagacgaagaaacaggatta
cagattgttgcaagggccattgaatcgcctttgaggactatcgtggaaaatgccggtgga
gaaggttctgttgttgttgccaaagttatagaaggcaaaggccattttggttacgatgcg
aaaactgaaacctatgtagacatgcttaaagcaggtattatagatcctaagaaagtaact
agggttgcattggaaaatgccgcttctgttgctggaatgatcttgaccaccgagtgtgca
ttggtcgacattaaagaagagactcctgcaggcccaccaatgggtggcggtatgccagga
atgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (102)   
   KEGG ORTHOLOGY (1)   
   RefGene (99)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (113)   

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