KEGG   Synechococcus sp. KORDI-100: KR100_01625
Entry
KR100_01625       CDS       T03344                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
synk  Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:synk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:synk03032]
    KR100_01625 (gyrB)
   03400 DNA repair and recombination proteins [BR:synk03400]
    KR100_01625 (gyrB)
Enzymes [BR:synk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KR100_01625 (gyrB)
DNA replication proteins [BR:synk03032]
 Prokaryotic type
  DNA Topoisomerases
   KR100_01625 (gyrB)
DNA repair and recombination proteins [BR:synk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KR100_01625 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C DUF6507
Other DBs
NCBI-ProteinID: AII42107
UniProt: A0A076GZR6
Position
323552..325519
AA seq 655 aa
MSDASKVQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGH
CDGILVVLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFGAGGYKVSGGL
HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGTLRSEPLPAGQDDQTGTSVCFKP
DAEIFTVGIVFDYATLAARLRELAYLNGGVRIVFRDERESSRTADGEAHEEIYFYEGGIK
EYVAYMNAEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHI
EGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGN
TEVRGIVDNLVGEALGQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESST
LPGKLSDCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIY
KNTEIQALITALGLGIKGEDFDEKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKDLV
EGGYIYIACPPLYKVERGKNHTYCYNEADLQKTLDGFGEKANYTIQRFKGLGEMMPKQLW
ETTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgagcgacgcttccaaggttcagaacgcctacggcgctgagcagatccaggtgctggag
ggtcttgaacccgtccgcaagcgcccgggcatgtacatcggctcgacggggccccgcggt
ttgcatcacctcgtctatgaggtggtggacaattcggttgatgaagccttagccggtcac
tgcgacggaattctcgttgtcttgggtgaggacggctccgcgtccatcagcgataacggt
cgcgggattccaacggacgtgcatccccgcaccggcaagagtgcgcttgagacggtgctc
acggtgctgcatgccggaggcaagttcggcgccggtggctacaaggtgtccggcggtttg
cacggtgttggtgtttcggtggtcaacgctctcagcgagtgggttgaggtcaccgtccgc
cgccagggtcaggtccatcgccaacggtttgagcggggtgccccgatcggcacgcttcgt
tcagaaccgttgcccgctggtcaggacgaccagacgggcacgtcggtctgcttcaaaccg
gatgcggagatcttcaccgttggcattgttttcgactacgccactttggctgcgcgtctg
cgagaacttgcctacctcaacggtggggtgcgcattgttttccgtgatgaacgggagtca
tctcgaacggccgatggtgaagcccatgaagaaatctacttttacgagggcggtatcaag
gaatatgttgcctacatgaatgcggagaaagatgctctgcatccagacattatttatgtc
aattccgagaaggatggcgttcaagttgaagcagcgctgcagtggtgttctgatgcctac
tctgacagcattcttggatttgcgaacaacattcgtaccgttgatggtgggacccatatc
gaaggcctcaagacggtcctgacccgcaccttgaatgcttttgccaaaaagctcgggaag
cgtaaggaatctgattcgaatctggctggcgaaaatattcgcgagggattgacggctgtg
ctgtcggtgaaagttccggagccggaatttgagggtcagaccaagaccaaacttgggaac
actgaagtgcgcggcattgttgataatctcgtcggtgaagcacttggccagtttttggaa
ttcaatccatccgtgattggattgattcttgagaaagccattcaggctttcaatgctgcg
gaagcggcccgacgcgctcgtgagttggtcaggcgcaaaagtgttctggagagttcaaca
cttcctggcaagctttccgattgcagttcccgcgatccttccgagtccgagatttacatc
gtggagggcgactctgctggtggttcggccaaacagggacgtgatcgtcgctttcaagcg
attcttccgctgcgcggaaaaattctcaatatcgaaaaaacagatgatgccaagatctac
aaaaatactgagattcaggctctgatcactgccctcggtctgggaattaaaggggaagat
tttgatgaaaaaaatctgcgttaccaccgcgttgtgatcatgaccgacgctgatgtcgat
ggtgcccacattcgaacattactgctcaccttcttttaccgttatcagaaggatcttgtc
gaaggtggttacatctatattgcctgtcctcccctttataaggtcgagcgcggcaagaac
cacacctattgctacaacgaggccgatttacagaaaacgctggatggttttggtgagaaa
gccaactacaccattcaacgcttcaagggccttggcgagatgatgcccaagcagttgtgg
gaaaccaccatggacccgacaacccggatgatgaagcgtgtggaaatcgaagacgcgctc
gaggctgaccgcatcttcaccattttgatgggcgacaaggtggctcctcgtcgggaattc
attgaaacccacagcgctgagttggatatggctgcactcgatatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system