KEGG   Synechococcus sp. KORDI-100: KR100_02210
Entry
KR100_02210       CDS       T03344                                 
Name
(GenBank) ATPase AAA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
synk  Synechococcus sp. KORDI-100
Pathway
synk03420  Nucleotide excision repair
synk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:synk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KR100_02210
   03430 Mismatch repair
    KR100_02210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:synk03400]
    KR100_02210
Enzymes [BR:synk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KR100_02210
DNA repair and recombination proteins [BR:synk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KR100_02210
   MMR (mismatch excision repair)
    Other MMR factors
     KR100_02210
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 DEAD ResIII AAA_16 AAA_22
Other DBs
NCBI-ProteinID: AII42217
UniProt: A0A076H008
Position
441301..443694
AA seq 797 aa
MSFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGAHGVDPAQVLAVTFT
NKAAREMKERLELLLAQRLAQSQFGQPWSTLPPVEQRQLRSRIYREVTKELWIGTFHALF
ARMLRFDIDKFKDSEGLTWTRQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKVRWAIS
NAKNQGWLPDQLEANAEGQRGKLTAETYRRYRRALAANNALDFDDLLLLPVQLLQQNEQV
CSYWHRRFRHVLVDEYQDTNRTQYELIKLLVTGGQDPQKVKDWGGRSVFVVGDADQSIYS
FRAADFTILMGFQDDFGDREPDDSTRTMVKLEENYRSTATILEAANALIANNSERIDKVL
RPTRGDGELISLTRCDDEIAEAEAVVHRLRMLEAAHPELSWGDMAVLYRTNAQSRAVEES
LVRWGIPYVVVGGLRFYDRREIKDLLAYLRLLVNPADTVSLLRVINVPKRGIGKTTIQRL
TDAANQLGIPLWDVVSDPEAVRSLGGRSAKGLLQFCELLNDLRQQVTEAAPSELIQQVME
KSGYVRELITEGTDEAEERRRNLQELVNAALQFQEENDEADLEGFLATAALSSDADNKDT
AADRVTLMTLHSSKGLEFPVVCMVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAKER
LFLSHASERRLWGGMREAAVPSVFLSELPEALVQGDLPQSGGASLRRERRLERLTRVDRD
VTSSPPANAVRRRHAGPAPGRSWSVGDKVIHSSFGLGEITHTFGSGEKVSIAVKFTGMGP
KILDPRLAPIEPVDEAS
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgagcttcttggccggcctcaacgatgcccagcgcagggcagtggatcaccatgaaggc
cctttactggtggtggcaggtgccggcagcggcaaaacacgagccctcacccatcgcatt
gcccatctgatcggtgcccatggggtggatccggcacaggtgctggccgtgacattcacc
aacaaggcggctagggaaatgaaggagcgcctggagctcctgctggcccagcgcctggcg
caaagccagttcggccagccctggagcacgctgccgcccgtggaacagaggcagttgcgg
tcccgcatctaccgggaggtgaccaaagaactctggatcggcaccttccatgccttgttc
gcacggatgctgcgatttgacattgacaaattcaaggactccgaaggcctcacctggaca
cgtcagttctcgatctacgacgaggcggatgcccagagcctcgtcaaagagatcgtcacc
caggagttgcagctcgatcccaaacgtttcgaaccgaagaaggttcgctgggccatcagc
aatgccaagaatcagggctggttgcctgatcagctggaggccaacgccgaaggtcagcgc
ggcaagctcaccgctgagacctaccggcgatatcgcagggccctggcggccaataacgct
ctggatttcgatgatctgctcctcctccctgttcagctgctgcagcagaacgaacaggtg
tgcagttactggcaccgacgctttcggcacgtcctggtggatgaataccaggacacgaac
cgcacgcagtacgaactgatcaagttgctggtgacgggcggacaagacccccagaaggtc
aaggactggggtggtcgctccgtgtttgtggtgggcgatgcggaccagagcatctacagc
ttccgtgccgctgatttcacgatcctgatgggttttcaggacgacttcggcgatcgagaa
cctgacgactcgacgcgcacgatggtgaagctcgaggagaactaccggtccaccgcgacg
attctcgaggctgccaacgctctgatcgccaataacagcgagcggatcgacaaagtgctg
cggccgacccggggggacggtgagctgatcagcctcacgcgttgtgatgacgagattgct
gaggctgaagctgtggtgcaccggttgcgcatgttggaagcggctcacccggagctgagc
tggggagatatggcggttctctatcgcaccaatgcccagtcccgggccgttgaagagtct
ctggtgcgctgggggattccctatgtagtggtcggtggactgcgcttctatgaccggcgc
gaaatcaaggacctgctggcctatctgcgcctactagtgaatccggcagacaccgtcagc
cttctgcgtgtgatcaatgtgcccaagcggggcatcggcaagacaaccatccagcggttg
actgatgcggccaatcaactggggatcccgctctgggatgtcgtcagtgatcccgaagcg
gtgcgttccctgggcggtcgctccgcaaaaggcctgcttcagttctgcgaactcctcaac
gatctgaggcagcaggtgaccgaagccgctccatcggaactgatccagcaggtgatggaa
aagagtggctacgtccgtgaactgatcacggagggaaccgatgaggcggaggagcgtcgg
cgcaatctgcaggagctggtgaatgctgctctgcagtttcaggaggagaacgacgaggcg
gatcttgagggattcctcgccacggctgccctgtccagtgatgccgacaacaaggacaca
gcagccgatcgcgtcacgctgatgacattgcacagcagcaagggactggaatttcccgtc
gtatgtatggtgggattggagcagggtctattccccagttatcgctcccttgatgacccc
gcttccctggaggaggagagacggctctgttacgtcgggatcacccgtgccaaggaacgc
ctgttcctctcccatgccagtgaacgccggctgtggggcggcatgcgtgaggctgccgtg
ccgtccgtgttcctgtcggaactgcctgaggcactggtgcaaggtgatttgccccagagc
ggtggagcctccttgcgacgggagcggcgcttggagcgtctgacccgcgtcgatcgggat
gtgacatcgtccccccccgccaatgctgttcgacggcgacatgccggacctgccccagga
cgcagctggagtgttggcgacaaggtgattcacagcagcttcggcctcggcgagatcacc
cacaccttcggcagtggtgagaaggtgtcgatagccgtgaagttcacagggatgggaccc
aagattcttgatccccgactggcaccgatcgagccggtcgatgaggcgtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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